Adhaeretor mobilis: HG15A2_25060
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Entry
HG15A2_25060 CDS
T07351
Symbol
rtcB_1
Name
(GenBank) RNA-splicing ligase RtcB
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
amob
Adhaeretor mobilis
Brite
KEGG Orthology (KO) [BR:
amob00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
amob03016
]
HG15A2_25060 (rtcB_1)
Enzymes [BR:
amob01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
HG15A2_25060 (rtcB_1)
Transfer RNA biogenesis [BR:
amob03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
HG15A2_25060 (rtcB_1)
Prokaryotic type
tRNA splicing ligases
HG15A2_25060 (rtcB_1)
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Gene cluster
GFIT
Motif
Pfam:
RtcB
DUF7964
Motif
Other DBs
NCBI-ProteinID:
QDS99214
UniProt:
A0A517MWG1
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All DBs
Position
complement(3037680..3038813)
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AA seq
377 aa
AA seq
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MTQADLAPLTTWLMEPLSREVSRSVDRLRSSDDVQHVALMPDVHLSRDVCIGAVVATKDL
VYPSAVGGDFGCGMAAVSFDVEATAIDNEHSAAKILAGLYECVPANKHQQLRELPVSLEI
LQLSDARLQRIADREGRVQLGTLGRGNHFLELQSDQGGQLWVMIHSGSRAIGQAVMERHM
RSANTGESGLKWLDTAEGQGQAYLSDVQWARKYAAENRLAMMAAVTQLLDTLFGIKADWD
SLIHCDHNHVQREVHDGEWRWIHRKGAQSAIANEPGIVPGSMGAASFHTLGRGCRDALTT
CSHGAGRQLSRTEARQKIGGKEFARQVGGLWYDHRRTTKLRDEAPAAYKDIRQVMKAQRD
LTRVIRELSPLLTYKGV
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atgacacaagctgacttagcacctttgacaacgtggctaatggagcctctctcacgagag
gtgtcacggtcagtcgatcgcttgcgcagttcagacgatgttcagcatgttgccttgatg
cctgacgtgcatctatccagagatgtctgcatcggcgccgtagttgctacgaaagatctc
gtttacccgtctgctgtaggtggtgattttgggtgtggcatggccgcggtctctttcgat
gttgaggcaactgccatcgataacgaacattcggcggcaaagatactagctggactttac
gagtgtgtacctgctaataagcatcaacagctgcgcgaacttccagtaagtttagagatc
ttgcagctaagtgatgcgcgattgcagcgaatcgctgacagggagggtcgcgtgcagcta
gggacgttagggcgtggaaatcatttcctggaactccagtctgatcagggcggccaactt
tgggtgatgatccacagcggctcacgcgcaatcgggcaagcggtcatggaacgtcacatg
agaagcgctaacactggagaatctggcctcaaatggctagatacggctgaggggcaaggt
caagcctacctatctgatgtccaatgggctcgtaagtacgctgctgagaatcgccttgcc
atgatggcagcggttactcagctcttggacacactatttggtatcaaagcagactgggat
tccctaattcactgcgaccacaatcatgtgcagcgcgaggtgcacgacggtgaatggcga
tggatacatcggaaaggagcacagtctgctatagcaaacgaaccagggattgttccaggt
tcaatgggagcagccagtttccataccctgggcaggggctgcagagatgcccttacgact
tgttcgcatggagcaggccgtcagctcagtcgcactgaggcacgacagaaaattggtggc
aaagagtttgctcgacaggttgggggactgtggtacgaccatcgacggaccacgaaactg
cgtgacgaggcaccggcagcttacaaggacatcaggcaagttatgaaagcccagcgagac
cttactcgggttatccgagaattgagtccattgctgacttacaagggtgtttga
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