Adhaeretor mobilis: HG15A2_25600
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Entry
HG15A2_25600 CDS
T07351
Symbol
rtcB_2
Name
(GenBank) RNA-splicing ligase RtcB
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
amob
Adhaeretor mobilis
Brite
KEGG Orthology (KO) [BR:
amob00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
amob03016
]
HG15A2_25600 (rtcB_2)
Enzymes [BR:
amob01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
HG15A2_25600 (rtcB_2)
Transfer RNA biogenesis [BR:
amob03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
HG15A2_25600 (rtcB_2)
Prokaryotic type
tRNA splicing ligases
HG15A2_25600 (rtcB_2)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcB
Motif
Other DBs
NCBI-ProteinID:
QDS99238
UniProt:
A0A517MWI4
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All DBs
Position
complement(3062720..3064222)
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AA seq
500 aa
AA seq
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MTMTQATEQKHEIIANGEATAIMPTGGKQKPITVIGTEAIRNTFDDLCLQQAINSRQAPG
VTDLVLNPDAHCGYGAPVGCVMVSPSHVYPGPVGVDIKCSMSLLQTSLPADAVDDKKVRR
ALIKAICDRTPTGAGRGQRNVPKSRHVDEALGKRVLVEGASRGVCEELGIPAEWANHCED
ASHVGHNDSTGSLALRLEKLLPNMYKFADKMSQLGSYGGGNHFGECEVVQVGEDKRSREA
AEVFGLVDGGVAFLSHCGSRGIGHQLATGQFKALQNKFEQWDIPLPGQDKQLVYAPLGTA
EANAYLDDMALGANFATVNHMLINALVLEAFQEVIPGTTGQLVYFISHNIARKEIVDNRP
AWVHRKGATRAFPGGHHALKGTPFAKTGHPILLPGNPQAGSAVMVADEGAALSCYSVNHG
AGRQLGRKAAKRALDQAEVDRSFDETDILTNCRSYPIDEAPAAYKDFDEVLHSVKSAGLA
SEVARLKARFVIKDGDKADD
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atgacaatgacacaggcaactgaacaaaaacacgaaatcatcgccaatggcgaagcgact
gcgattatgccaacaggcggaaagcagaagccaattaccgtcatcggtaccgaagcaata
cgtaacaccttcgatgacctgtgcttgcagcaagcaattaactcgcgacaagcaccgggt
gtgacggacttggttctcaacccagacgcgcattgcggttacggagcgccagtaggttgc
gtgatggtgtcaccatctcatgtttacccaggcccagtaggcgttgacatcaagtgttca
atgagcctgttgcagaccagcctgccagccgacgcggtagatgacaagaaggtgcgtcgc
gcattgattaaagcgatttgcgatcgaactccaacgggtgcaggtcgcggtcagcgaaat
gtgcctaaatctcgacacgttgacgaagctctgggcaagcgagtgcttgttgaaggcgct
tcgagaggcgtttgcgaggaattggggattcctgctgaatgggccaaccactgtgaagac
gccagccacgtaggccacaatgactcgaccggttcgctcgcgctccgcctagagaagctg
ctgccaaacatgtataagtttgccgacaaaatgtcgcagcttggctcctacggaggcggc
aaccattttggagaatgcgaagtcgttcaggtgggtgaggacaaacgctctcgtgaagcg
gctgaagtatttggcttagtagacggtggtgtggcattcttgtcgcactgcggttcacgc
ggcattggccatcaattggccacaggacagttcaaggctctgcaaaacaagtttgagcag
tgggatattccgttgccaggccaagacaaacagttggtttacgcaccgcttggcacggct
gaagcaaatgcgtacctcgacgacatggcgctcggtgcaaactttgccacagtcaaccat
atgttgatcaacgctctggtgctcgaagcgtttcaggaagtgattcctggcacgaccggt
cagttggtgtattttattagccacaacattgcgagaaaggaaattgtcgataaccgccca
gcgtgggtgcatcgcaaaggggcgactcgtgcgttcccaggcggacatcacgctttgaag
ggaacgccgtttgccaaaactggtcatccaatcctgctgccaggcaatccacaggctggt
tccgcagtgatggttgccgatgaaggtgccgcgttaagctgctacagcgtcaaccacggt
gcaggtcggcaactgggtcgtaaagcggccaaacgagcgctggatcaagctgaagtcgat
cgttcgtttgacgagactgacattttgacgaactgccgcagctacccaatcgatgaagca
ccagctgcttacaaagattttgatgaggtactgcactcagtgaagtcggctgggctagct
agcgaagttgcaaggttgaaagcacggtttgtgattaaagatggagataaagcagatgac
tga
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