Adhaeretor mobilis: HG15A2_44710
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Entry
HG15A2_44710 CDS
T07351
Symbol
cshA
Name
(GenBank) DEAD-box ATP-dependent RNA helicase CshA
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
amob
Adhaeretor mobilis
Pathway
amob03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
amob00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HG15A2_44710 (cshA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
amob03019
]
HG15A2_44710 (cshA)
03009 Ribosome biogenesis [BR:
amob03009
]
HG15A2_44710 (cshA)
Enzymes [BR:
amob01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
HG15A2_44710 (cshA)
Messenger RNA biogenesis [BR:
amob03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
HG15A2_44710 (cshA)
Ribosome biogenesis [BR:
amob03009
]
Prokaryotic type
rRNA helicases
HG15A2_44710 (cshA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Cas3-like_C_2
SLFN-g3_helicase
Motif
Other DBs
NCBI-ProteinID:
QDT01129
UniProt:
A0A517N1W5
LinkDB
All DBs
Position
5403082..5404284
Genome browser
AA seq
400 aa
AA seq
DB search
MMAALEHVAYETPTPVQAGVIPVAITGADVLGQARTGTGKTAAFAIPILERMDQPRKSKK
PRAIALVPTRELAVQVRDEVDRLSHGRKLKTVALYGGKPIKSQIGRLERGCDFVVGTPGR
VLDHLSRGTLQLDELEVIVLDEADRMLDIGFRPDIEKILRSCPKDRQTLLLSATVAPAVE
KLAQRYMRDPTIMDFSPKGKSADTIEQRYFTIEQERKFDLLVRLLEREKPEQAIIFCRTK
RGTDKVHRKLSRKIKNASCIHGDMAQNVRDRVMKAFRAGESKLLVATDVVGRGIDVTNIS
HIINYDLPQSSDDYVHRVGRTGRMGREGVAYSFVTPEQGGELTRIEMLINKLLERDEIDG
FQAVAQAAPPAEEAKSDDPEKPAPPPPPGRRPRKRHRRGL
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atgatggccgccctggagcacgtcgcttacgaaacgcccactcctgtgcaggcgggcgtc
atacccgtagcgatcactggcgcggatgtgctcgggcaggctcgtaccggcaccggcaaa
acggctgcttttgcgattccgattctcgaacgtatggaccagccgcgcaagagtaagaag
ccgagagccattgcgcttgtgcccacccgagaactggccgtgcaagtgcgcgatgaagtc
gatcgcctgtcacacggtcgcaagctgaagaccgtagccctctacggcggcaagccgatc
aaatcgcaaatcggtcggctggaacggggttgcgactttgtcgtcggcacgccgggccgc
gtgctcgatcatctctcccgcgggacgttgcagctcgacgagctggaagtgatcgtgctc
gacgaagcagaccgcatgttggacatcggctttcggccggacattgaaaagatcctccgc
agttgcccgaaggaccgccaaacactcttgctgagcgcgacggtcgcgcccgcggtggaa
aaactcgcccagcgctacatgcgcgaccccacgatcatggacttctcgcccaagggcaag
tcggccgacacgatcgagcagcgttacttcacgatcgagcaagagcggaagttcgacttg
ctcgtgcgactgctggaacgtgaaaagccagagcaagcgatcattttctgccgcaccaag
cgggggaccgataaagtgcatcgcaagctaagtcgtaaaatcaagaatgcgtcttgcatc
cacggcgacatggcccagaatgtgcgtgatcgtgtgatgaaggctttccgcgctggcgaa
tcgaagctgctggtagcgaccgacgtcgtggggcgtggcattgatgtgacgaacatttca
cacatcatcaattacgatttgcctcagtcgtccgacgattacgtgcatcgcgtgggccgc
acgggtcgcatgggtcgcgaaggagtggcttactcgttcgtcacacccgaacagggtggc
gagctaactcgcattgagatgctgatcaacaagttgctcgaacgcgacgaaatcgatggc
ttccaagcagtcgcccaagctgctccgcctgctgaagaggcaaagtccgacgatcccgaa
aagccggcaccacccccgccaccaggacggcgcccgaggaaacggcatcgccgcggtctg
tag
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