Adhaeretor mobilis: HG15A2_45500
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Entry
HG15A2_45500 CDS
T07351
Symbol
rnr
Name
(GenBank) Ribonuclease R
KO
K12573
ribonuclease R [EC:
3.1.13.1
]
Organism
amob
Adhaeretor mobilis
Pathway
amob03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
amob00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HG15A2_45500 (rnr)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
amob03019
]
HG15A2_45500 (rnr)
03016 Transfer RNA biogenesis [BR:
amob03016
]
HG15A2_45500 (rnr)
Enzymes [BR:
amob01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
HG15A2_45500 (rnr)
Messenger RNA biogenesis [BR:
amob03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
HG15A2_45500 (rnr)
Transfer RNA biogenesis [BR:
amob03016
]
Prokaryotic type
tRNA degradation factors
HG15A2_45500 (rnr)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
CSD2
S1
OB_RNB
RNase_II_C_S1
Motif
Other DBs
NCBI-ProteinID:
QDT01208
UniProt:
A0A517N2I0
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All DBs
Position
5495041..5497260
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AA seq
739 aa
AA seq
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MPELSDAILRHVNDERYRPVKPKTIAKKLGLEEADVSRVKKEVKRLVREKKLAYGPSHLV
CPVKADHPAAKVGEQPAKNKRPKQITGMFRRNASGYGFVRPEGTTKSEGRDSDVFIPANG
AGDAASGDTVRIKLDGKMGRKGKPEGRITEVIERANNRFVGTYFEEADQALVQVDGGVFM
KPIYVGDPGAKGARTDDKVVMEMVRFPSNVRDGEGVIVEILGQRGQPGVDTLSVIHEFNL
PGPFPEDVLEEAREQAVQFDESIPKKRTDFTGETVITIDPDTARDFDDAISLEQLDNGHW
VLGVHIADVSHFVQPKTPLDREARDRATSVYLPDRVIPMLPEIISNNLASLQPDRVRYAV
TAKIEFNAEGVRIGTDVYKAAIKSCRRFTYEEVDEYLADPKDWKSKLTPQVHQLLGNMHT
LAMILRKRRFDKGALELHMPELKIDLDKDGKVSGAHLQENTESHQIIEEFMLAANIAVAE
RLADEGLIFLRRVHGAPDPRRLKALTEFVKALGLKTDDLQSRFALQKLLDEVKNDPRQHA
VNFATLRSMQRAIYSPEDEGHFALASDCYCHFTSPIRRYPDLTIHRLIESLTEGRKPVQE
YQQILSLGDHCSEREQRATAAEREITKVKLLDYFEDKVGKKMDGIVTGVESFGLFVTATD
IPAEGLVHISSLTDDHYKFDRAGHVLTGFRSGGTFRLGDKVRIEVASVDLDKRELDFRVV
KSAKKAKQKGKDKHKKKRR
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
atgccagaacttagcgacgccattctccgccacgtgaacgacgagcgttatcgccccgtc
aaaccaaaaaccatcgccaagaaactggggctagaagaggccgatgtttcgcgcgtgaag
aaagaagtgaaacgcctggtgcgcgagaaaaagctggcctacgggccaagtcacttggtg
tgccccgtgaaggccgatcacccggccgcaaaagttggcgagcaaccggctaagaacaag
cgtcccaagcaaatcacgggcatgttccgccgcaatgccagcggctacgggttcgtgaga
cctgaaggcacgaccaagagcgagggtagagactccgacgtattcattcccgccaacggc
gcgggcgatgcggccagcggcgatacggtgcggatcaagctggacggcaagatgggacgt
aagggcaagcccgaaggccgcattaccgaggtgatcgagcgagcgaacaatcgctttgtc
ggcacttacttcgaggaggccgatcaggcgctcgtgcaagtcgatggtggcgtattcatg
aagcccatctacgtgggcgatccgggtgccaagggtgcccgcaccgacgacaaagtggtc
atggagatggtgcgattcccctcgaacgtgcgcgacggcgaaggcgtaatcgtggaaatc
ctcggtcagcgtggccaaccgggcgtcgatacgctctcggtcattcacgaattcaatctg
cccggtccgtttcctgaagatgtgctggaagaagcccgcgaacaggccgtgcagttcgat
gagtcgattcccaagaagcgtaccgacttcactggcgaaacggtcatcacgatcgacccg
gacacagcccgcgacttcgacgatgcgatttcacttgagcaactcgacaacggccactgg
gtgctcggtgtacacattgccgacgtttctcactttgtgcaaccgaaaacgccgctggat
cgcgaagcacgcgatcgggccaccagcgtgtacctgccggaccgcgtgatccccatgctg
ccagagatcatctccaataatttggccagtctccagccggatcgtgtgcgctatgccgtc
acagcgaagatcgagttcaacgcggaaggcgtgcgcatcggcaccgatgtctacaaggca
gccatcaaaagctgccggcgctttacctatgaagaagttgacgagtacctcgcggacccg
aaggactggaagtcgaagctcaccccgcaggtacaccagttactcggcaacatgcacacg
ctagcgatgattctccgcaagcgacggttcgacaaaggcgcactcgaacttcatatgcca
gagctgaagatcgatctcgacaaagacggcaaggtcagcggtgcccacttacaagagaat
accgagagccatcagatcattgaagaattcatgctagctgcgaacattgccgtggcggag
cgtctggctgacgagggtctcatcttcctacgccgcgttcacggcgcgcctgatccacga
cgtttgaaggcactcacggagtttgtaaaagcactcggcctgaagactgacgacctgcag
agccgcttcgcgctgcagaagcttcttgacgaggtgaagaacgacccacggcaacatgcc
gtcaacttcgctacgctgcgttccatgcaacgagcgatctacagccctgaagatgaaggg
cacttcgcgttggcgagcgattgctactgtcattttacctcgccgattcgtcgttatcct
gacctcacgattcaccgtttgattgaatcgctcaccgagggacgcaagcctgtacaggaa
taccaacagattctctcgctaggcgatcattgcagcgagcgcgagcaacgggcaacagca
gcagagcgcgagatcaccaaggtgaaactgctcgactacttcgaggacaaagtcggcaag
aaaatggacggcatcgtcaccggcgtcgaaagcttcggactgttcgtcaccgccacagac
atcccggccgagggcctcgtgcatatcagctcgctcacagacgatcactacaagttcgat
cgcgccggccacgtgctcaccggcttccgctccggcggtaccttccgcctgggggacaag
gtacgcatcgaagtcgcgtcggtcgatctggacaaacgcgagcttgacttccgtgtcgtg
aagagcgccaaaaaggcgaagcagaagggcaaagataaacacaagaagaaacgccgctag
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