Adhaeretor mobilis: HG15A2_47500
Help
Entry
HG15A2_47500 CDS
T07351
Symbol
rne
Name
(GenBank) Ribonuclease E
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
amob
Adhaeretor mobilis
Pathway
amob03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
amob00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HG15A2_47500 (rne)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
amob03019
]
HG15A2_47500 (rne)
03009 Ribosome biogenesis [BR:
amob03009
]
HG15A2_47500 (rne)
Enzymes [BR:
amob01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
HG15A2_47500 (rne)
Messenger RNA biogenesis [BR:
amob03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
HG15A2_47500 (rne)
Ribosome biogenesis [BR:
amob03009
]
Prokaryotic type
rRNA processing factors
HG15A2_47500 (rne)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
Antiterm
DUF4901
Motif
Other DBs
NCBI-ProteinID:
QDT01408
UniProt:
A0A517N343
LinkDB
All DBs
Position
5725181..5726899
Genome browser
AA seq
572 aa
AA seq
DB search
MKQEMLINVAQPEECRIAIVEDNQLEELYVERSSQDNYVGNIYKGKIVNLEPSIQAAFVD
FGVGRNGFLHISDVESQYFRQGGFDPDKPIQPDGTQRDDREERKERSSSNGAASDSHDED
DFDGEEGGEESKEREQGGGTRTRKRPQQRKVRPGVRPRVKPPIQDIFRRGDEVLVQVIKE
GIGTKGPTLSTYISIPGRYLVLMPALGRIGVSRKIEDEQARRRLRDILRDLSPPKGLGFI
VRTAGTDRTKSELSRDLAYLLRLWKTIVKRIKSTPAPCDIYQESDMIIRTIRDIFTSEVD
SIHIDQEEAYERAKEFLQITMPRYASRLQLYDGKEPLFHKYKIDEEIAQINHRQVPLKGG
GSIVIDQTEALVAIDVNSGSFRTDGSAEESAFRLNQIAAKEIARQLRLRDLGGVVVNDFI
DMRHDRHRRKVENTLRDAVRRDRARTKILRTSPFGLIEMTRQRIRPSLKRSVYKECPGCS
GTGVVKSSESMAIEVVRKLIMAAQDTRVKKLTVAIEEDVASYINNRKRRELARIEDVHDI
ELLVDSREDVSPEFLRIACEDESGREIRVVDS
NT seq
1719 nt
NT seq
+upstream
nt +downstream
nt
atgaaacaagaaatgctgatcaacgtcgctcagccggaggaatgccggattgcgattgtt
gaggacaaccagcttgaagagctgtacgttgagcgaagtagccaagacaactacgtcggc
aacatttacaaaggcaaaatcgtaaacctagaaccaagcatccaggcggcgttcgttgat
tttggcgtgggccgcaatggcttcctacatatcagcgacgtagagtcgcagtacttccgt
cagggtgggttcgaccccgacaagccgatccagccggatggaacgcagcgcgacgatcgc
gaggagcgaaaagaacgcagcagttccaatggcgcggcaagcgactcgcacgacgaagac
gacttcgatggcgaagaagggggtgaggaaagcaaagagcgcgagcaagggggaggcacc
cgtactcggaagcgtccgcagcagcgcaaagtgcgacctggcgtacgtccgcgcgtgaag
ccaccgattcaggacattttccgccgcggcgacgaagtgcttgtgcaagtcatcaaagaa
ggcatcggcacaaaagggcccacgctttccacctacatcagcatcccaggccgttacttg
gtgctgatgcccgcgttaggacgcatcggcgtttcgcgcaagatcgaagacgagcaagcc
cgccgccggctgcgcgacatccttcgcgacctcagcccgccgaagggcctaggatttatc
gtacgcaccgcgggcaccgatcgtaccaagagcgaactgtcccgcgacttggcgtacttg
ctacgtctgtggaaaacgattgtaaaacgcatcaagtccacgcccgctccgtgtgatatc
taccaagagtccgacatgatcattcggacaattcgcgacattttcaccagcgaagtcgat
tcgatccatatcgatcaagaggaagcctacgaacgggcaaaagagttcctgcaaatcacg
atgccccgctacgcgagtcggctgcaactctacgatggcaaggagccgttgttccataag
tacaagatcgacgaagagatcgcccagatcaatcaccgccaggtgccactcaaagggggc
ggttccatcgtgattgatcaaaccgaagcacttgtcgcgatcgacgtgaacagcggtagc
ttccgcacagatggctctgctgaagagtccgcattccgcttgaaccaaatcgccgctaag
gaaatcgctcgacagctacgcctgcgcgatctgggcggcgtcgtggtaaacgactttatc
gacatgcgacacgatcgtcatcgtcgcaaagtagagaacacgctccgcgacgcagtgcga
cgcgatcgagcacgcaccaagatcttgcgcacgagtcccttcggcctgatcgaaatgaca
cgccagcggattcgtcccagcctcaaacgcagcgtctacaaggaatgccccggctgctcg
ggaaccggcgtggtgaagagttccgaaagcatggcgatcgaagtggtccgcaagctcatc
atggccgcacaggatacacgcgtaaagaagctaaccgtcgcaatcgaagaagatgtggcc
agctacatcaacaaccgcaagcggcgagagctagcccgtatcgaagacgtccacgatatc
gaactgctcgttgacagccgcgaggacgtatcgccagagttcttgcgcatcgcctgcgaa
gatgaaagcggtcgcgagattcgcgtggtagatagctga
DBGET
integrated database retrieval system
