Amycolatopsis mongoliensis: QRX60_08055
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Entry
QRX60_08055 CDS
T09938
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
amog
Amycolatopsis mongoliensis
Pathway
amog03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
amog00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
QRX60_08055
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
amog03021
]
QRX60_08055
03400 DNA repair and recombination proteins [BR:
amog03400
]
QRX60_08055
Enzymes [BR:
amog01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
QRX60_08055
Transcription machinery [BR:
amog03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
QRX60_08055
DNA repair and recombination proteins [BR:
amog03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
QRX60_08055
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
ART
Motif
Other DBs
NCBI-ProteinID:
WIY03795
UniProt:
A0A9Y2NMV7
LinkDB
All DBs
Position
complement(1695673..1699584)
Genome browser
AA seq
1303 aa
AA seq
DB search
MLDVNFFDELRIGLATADDIRQWSYGEVKKPETINYRTLKPEKDGLFCEKIFGPTRDWEC
YCGKYKRVRFKGIICERCGVEVTRAKVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDL
APKDLEKIIYFAAYVITGVNTELRHNDLPTLENEIGVERKNLETKRDADIEARAQKLEAD
LAELEAEGAKSDVRRKVKEGGEREMRQLRDRAGRELDRLEEVWTTFTKLDTRQLIADELL
YRELVDRYGEYFTGGMGAEAIQKLATEFDVAAEAESLRDTIRNGKGQKKLRALKRLKVVA
AFQATGNDPRGMVLDAVPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLIDL
GAPEIIVNNEKRMLQEAVDALFDNGRRGRPVTGPGNRPLKSLSDLLKGKQGRFRQNLLGK
RVDYSGRSVIIVGPQLKLHQCGLPKDMALELFKPFVMKRLVDLNHAQNIKSAKRMVERSR
PQVWDVLEEVITGHPVMLNRAPTLHRLGIQAFEPQLVEGKAIQLHPLVCEAFNADFDGDQ
MAVHLPLSAEAQAEARILMLSANNILSPASGRPLAMPRLDMVTGLFHLTRLNEKAEGAGN
AYSSPAEAIMAFDRKALGLHAPIKIRVTDRQPAKADEARLAEKGWEPGKAWLAETTLGRV
LFNELLPADYPFINEPMPKKRQAAIVNDLAERYSMTQVAQTLDRLKDAGFYWATRSGVTV
AISDVLTPVGKAAILDEYEGKASQVEKRYQRGQLSHTERNNELVKVWTQATEEVHKIMET
ALPDDNPIAMIVKSGAAGNMTQVRSLAGMRGLVSNPKGEYIPRPIKANFREGLSVAEYFI
ATHGARKGLADTALRTADSGYLTRRLVDVSQDVIVREVDCGTTRGIMMPIGEDIGDGKVL
RDQHVETSVYARNLATDAVDAKGNVVLNAGDDIGDPAIDKLLSSGISKVKVRSVLTCESA
VGICATCYGRSMATGQLVDVGEAVGIVAAQSIGEPGTQLTMRTFHQGGVAGDDITTGLPR
VQELFEARVPKGKAPIADVDGRVRIEESERFWKITLIPDDGGEEIVFDKLSKRQRLANTP
NGPLGDGDHVNVGQQLLEGTPDPHEVLRVMGPREAQMHLTDEVQKVYRAQGVSIHDKHIE
VIVRQMLRRVTIIDSGATDFLPGELPERTKFEATNRAAVAEGGEPASGRPVLMGITKASL
TTDSWLSAASFQETTRVLTDAAINGRSDRLVGLKENVIIGKLIPAGTGINKYRNIQVQPT
EEARVAAYAIPSYDDGYYTPDVFGTGTGAAVPLDDYDFGRDFR
NT seq
3912 nt
NT seq
+upstream
nt +downstream
nt
gtgctggacgtcaacttcttcgatgagctccgcattggtctcgccacggccgacgacatc
cgtcagtggtcgtacggcgaggtcaagaagccggagaccatcaactaccggacgctcaag
cccgagaaggacggcctcttctgcgagaagatcttcggcccgacccgggactgggagtgc
tactgcggcaagtacaagcgcgtccgcttcaagggcatcatctgtgagcgctgcggcgtc
gaggtgacccgcgccaaggtgcgccgcgagcggatgggccacatcgagctggccgccccg
gtcacccacatctggtacttcaagggtgttccctcgcgcctcggctacctgctggacctg
gcgccgaaggacctcgagaagatcatctacttcgctgcttacgtcatcacgggcgtgaac
acggagctgcgccacaacgacctgccgaccctcgagaacgagatcggcgtcgagcgcaag
aacctcgagaccaagcgtgacgcggacatcgaggctcgcgcgcagaagctggaagccgac
ctggccgagctggaggcggagggcgccaagtccgacgtccgccgcaaggtcaaggagggc
ggcgagcgcgagatgcgccagctgcgtgaccgcgccggtcgcgagctggaccgcctcgag
gaggtctggacgaccttcacgaagctcgacacccgccagctgatcgccgacgagctgctg
taccgcgagctggtcgaccgctacggcgagtacttcaccggcggcatgggcgcggaggcc
atccagaagctggccaccgagttcgacgtcgccgcggaggcggagagcctgcgcgacacg
atccgcaacggcaaggggcagaagaagctccgcgcgctgaagcggctcaaggtcgtcgcg
gccttccaggccaccggcaacgacccgcgcggcatggtgctcgacgccgtcccggtcatc
ccgccggacctgcgcccgatggtgcagctggacggtggccgcttcgcgacctccgacctg
aacgacctgtaccgccgcgtgatcaaccgcaacaaccgcctcaagcggctgatcgacctc
ggtgcgcccgagatcatcgtcaacaacgagaagcggatgctgcaggaggccgtcgacgcg
ctgttcgacaacggccgccgcgggcgtccggtcaccggcccgggcaaccggccgctgaag
tcgctgtccgacctcctcaagggcaagcagggccggttccgccagaacctgctcggcaag
cgcgtcgactactcgggccgttcggtcatcatcgtcggcccgcagctgaagctgcaccag
tgcggcctgccgaaggacatggcgctcgagctgttcaagccgttcgtcatgaagcggctg
gtcgacctgaaccacgcgcagaacatcaagtccgccaagcggatggtggagcgctcgcgg
ccgcaggtgtgggacgtgctggaagaggtcatcaccggccacccggtgatgctgaaccgc
gcgccgaccctgcaccgcctcggtatccaggccttcgagccgcagctggtcgagggcaag
gccatccagctgcacccgctggtctgcgaggcgttcaacgcggacttcgacggtgaccag
atggcggtgcacctgccgctgtcggccgaggcgcaggccgaggcccggatcctgatgctg
tcggcgaacaacatcctttcgccggcgtcgggccgtccgctcgccatgccgcgactggac
atggtgacgggtctgttccacctgacccgcctcaacgagaaggccgagggcgcgggcaac
gcgtactcgtcgccggccgaggccatcatggccttcgaccgcaaggcgctgggcctgcac
gccccgatcaagatccgcgtcaccgaccgccagccggccaaggccgacgaagcgcggctc
gcggaaaagggctgggagccgggcaaggcgtggctggccgagacgaccctgggccgcgtg
ctgttcaacgagctgctgccggcggactacccgttcatcaacgagccgatgccgaagaag
cgtcaggccgcgatcgtgaacgacctcgccgagcggtactcgatgacccaggtcgcgcag
accctggaccgcctgaaggacgccgggttctactgggcgacccgctcgggcgtcaccgtc
gccatctcggacgtgctcaccccggtgggcaaggccgccatcctcgacgagtacgagggc
aaggcctcccaggtggagaagcgctaccagcgtggtcagctgtcccacaccgagcgcaac
aacgagctcgtcaaggtgtggacgcaggccaccgaagaggtccacaagatcatggagacg
gcgctgccggacgacaacccgatcgccatgatcgtgaagtcgggcgcggcgggcaacatg
acgcaggtccggtcgctggccgggatgcgtggcctggtgtcgaacccgaagggtgagtac
atcccgcgtccgatcaaggccaacttccgtgagggcctgtcggtggcggagtacttcatc
gcgacgcacggtgcccggaagggcctggcggacacggcgctgcggaccgccgactcgggt
tacctgacccgtcgtctggtggacgtctcgcaggacgtcatcgtccgcgaggtcgactgc
ggcaccacccgcggcatcatgatgccgatcggcgaggacatcggcgacggcaaggtgctg
cgcgaccagcacgtcgagacctccgtgtacgcgcggaacctcgcgacggacgcggtggac
gccaagggcaacgtcgtgctgaacgccggcgacgacatcggcgacccggccatcgacaag
ctgctttcgagcggcatctcgaaggtcaaggtccgctcggtgctcacctgcgagtcggcc
gtcggcatctgcgcgacctgctacggccgctcgatggcgaccggtcagctcgtcgacgtc
ggcgaggccgtgggtatcgtcgcggcccagtcgatcggtgagccgggtacgcagctgacg
atgcgtacgttccaccagggtggtgtcgccggtgacgacatcacgaccggtctgccccgt
gtgcaggagctcttcgaggctcgtgtcccgaagggcaaggcgccgatcgccgacgtcgat
ggccgcgtgcgcatcgaggagagcgagcggttctggaagatcacgctgatcccggacgac
ggcggcgaagagatcgtcttcgacaagctgtccaagcgtcagcggctcgcgaacaccccg
aacggcccgctgggcgacggcgaccacgtcaacgtcggccagcagctgctcgagggcacg
ccggacccgcacgaggtcctgcgggtcatggggccgcgcgaggcgcagatgcacctcacg
gacgaggtccagaaggtgtaccgggcgcagggtgtgtcgatccacgacaagcacatcgag
gtcatcgtgcggcagatgctgcgccgcgtgacgatcatcgactccggtgccacggacttc
ctgccgggcgagctgcccgagcggaccaagttcgaggcgacgaaccgggccgcggtcgcc
gagggcggcgagccggcttcgggtcgtccggtgctgatgggtatcacgaaggcgtcgctc
accacggactcgtggctgtcggcggcgtcgttccaggagaccacgcgcgtcctgaccgac
gcggccatcaacggccgctcggaccggctcgtgggcctcaaggagaacgtgatcatcggt
aagctgatcccggccggtacgggcatcaacaagtaccgcaacatccaggtgcagccgacg
gaagaggcccgggtcgcggcgtacgcgatcccgtcctacgacgacggctactacaccccg
gacgtgttcggtacgggtaccggtgccgcggtgccgctggacgactacgacttcggccgc
gacttccgctga
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integrated database retrieval system
