Amycolatopsis mongoliensis: QRX60_14145
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Entry
QRX60_14145 CDS
T09938
Name
(GenBank) RtcB family protein
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
amog
Amycolatopsis mongoliensis
Brite
KEGG Orthology (KO) [BR:
amog00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
amog03016
]
QRX60_14145
Enzymes [BR:
amog01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
QRX60_14145
Transfer RNA biogenesis [BR:
amog03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
QRX60_14145
Prokaryotic type
tRNA splicing ligases
QRX60_14145
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcB
Motif
Other DBs
NCBI-ProteinID:
WIY04926
UniProt:
A0A9Y2JWH3
LinkDB
All DBs
Position
2898535..2899725
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AA seq
396 aa
AA seq
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MYTAVEGARVPIRMWADPASVEDQAMRQLHNVANLPWVHGVAVMPDVHYGKGATVGSVIA
MRDAVSPAAVGVDIGCGMSAVRTSLTASDLPDDLGKLRRRVESAVPVGFGLHKTPVNPAK
VHGVGGWDAFWKGFGELHTGVQELHDRAARQIGSLGGGNHFIEVCLEQGGDDEGRVWLML
HSGSRNIGKELAERHMAVARKLPHNADLPDRDLAVFVAGTPEMAAYRRDLFWAQDYAARN
RATMVALVKQALKDVVPQTTFDDAISCHHNYVSEETYDGVELLVTRKGAIRAGSGDLGII
PGSMGTGSYIVRGLGNESSFRSASHGAGRRMSRTKAKKLFTADDLAAQTTGVECRKDSGV
VDEIPAAYKDIDSVIRAQTDLVEVVAHLKQVVCVKG
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atgtacaccgctgtcgaaggcgcccgcgtcccgatccgaatgtgggcggaccccgcgtcg
gtcgaagaccaggccatgcggcagctgcacaacgtcgcgaacctgccgtgggtgcacggc
gtcgccgtgatgcccgacgtgcactacgggaagggcgcgaccgtcggcagcgtcatcgcc
atgcgcgacgccgtttcgcccgccgcggtcggcgtggacatcgggtgcggcatgagcgcc
gtccggacgtcgctcaccgcgagcgacctgccggacgacctcgggaagctgcgccgacgc
gtcgaatcggccgtgccggtcggcttcgggctgcacaagacgcccgtgaaccccgcgaag
gtgcacggcgtcggcggctgggacgccttctggaagggcttcggcgagctgcacaccggg
gtccaggagctgcacgaccgggccgcgcgccagatcgggagcctcggcggcgggaaccac
ttcatcgaggtctgcctcgagcagggcggcgacgacgagggccgcgtgtggctgatgctg
cactcgggttcgcgcaacatcggcaaggagctcgcggagcggcacatggccgtcgcgcgc
aagctgccgcacaacgccgacctgcccgaccgggacctcgcggtcttcgtcgccggcacg
ccggagatggcggcttaccggcgtgacctgttctgggcgcaggactacgcggcgcgcaac
cgcgccacgatggtcgcgctcgtgaagcaggcgctgaaggacgtcgtcccgcagacgacc
ttcgacgacgcgatctcctgccaccacaactacgtctccgaggagacgtacgacggtgtc
gagctgctcgtcacccgcaagggcgcgatccgtgccggatcgggtgacctcgggatcatc
ccgggcagcatggggaccgggtcgtacatcgtccgcggtctcgggaacgagtcgtcgttc
cggtcggcgtcgcacggggcgggccgccggatgtcgcgcaccaaggccaagaagctgttc
accgccgacgacctcgcggcgcagacgaccggtgtcgagtgccgcaaggactcgggcgtc
gtcgacgagatcccggcggcgtacaaggacatcgattcggtgatccgcgcccagacggac
ctggtcgaggtggtggcgcacctcaagcaggtggtctgcgtcaagggctga
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