Amycolatopsis mongoliensis: QRX60_15960
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Entry
QRX60_15960 CDS
T09938
Name
(GenBank) DEAD/DEAH box helicase
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
amog
Amycolatopsis mongoliensis
Pathway
amog03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
amog00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
QRX60_15960
09124 Replication and repair
03420 Nucleotide excision repair
QRX60_15960
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
amog03021
]
QRX60_15960
03400 DNA repair and recombination proteins [BR:
amog03400
]
QRX60_15960
Enzymes [BR:
amog01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
QRX60_15960
Transcription machinery [BR:
amog03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
QRX60_15960
DNA repair and recombination proteins [BR:
amog03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
QRX60_15960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
DEAD
SNF2-rel_dom
Motif
Other DBs
NCBI-ProteinID:
WIY05264
UniProt:
A0A9Y2NKP5
LinkDB
All DBs
Position
complement(3264850..3266496)
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AA seq
548 aa
AA seq
DB search
MTDGPLIVQSDKTVLLEVDHAQAGDARVAIAPFAELERAPEHVHTYRITPLALWNARAAG
HDAEQVVDALTTYSRFPVPQPLLIDVVDVMGRFGRLQIANHPAHGLVMSTTDRAVLTEVV
RNKKISPMLGARIDEDTVLVHPSERGRLKQALLKVGWPAEDLAGYVDGEAHPIALDEQDW
HLRDYQRMAAEAFWAGGSGVVVLPCGAGKTLVGAAAMARAQATTLILVTNTVAGRQWKRE
LIARTSLTEEEIGEYSGEKKEIRPVTIATYQVITRKTKGEYRHLELFDSRDWGLVVYDEV
HLLPAPVFRMTADLQSRRRLGLTATLVREDGREGDVFSLIGPKRYDVPWRDIEAQGWIAP
AECTEVRVTLTDAERLEYATAEADERYKLAATALTKTPVIKSIVEKHAGEPTLVIGAYLD
QLEMLGDELDAPVIQGATRNKEREELFDKFRRGEIKTLVVSKVANFSIDLPEASVAIQIS
GTFGSRQEEAQRLGRLLRPKGDGRQAHFYSIVSRDTVDTEYAAHRQRFLAEQGYAYHIVD
ADDLLRPL
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
gtgactgatggcccgctgatcgtccagtccgacaagaccgtgctcctggaggtcgaccac
gcccaggccggcgacgcgcgcgtcgcgatcgcgccgttcgccgagctcgaacgggctccg
gagcacgtccacacctaccggatcacgccgctggccttgtggaacgcgcgtgccgcgggc
cacgacgccgagcaggtcgtcgacgcgctgacgacgtactcgcgcttccccgtgccgcag
ccgctgctgatcgacgtcgtcgacgtgatgggccggttcggcaggctgcagatcgccaac
cacccggcgcacggcctcgtcatgtcgaccaccgaccgcgcggtgctgaccgaggtcgtc
cggaacaagaagatcagcccgatgctcggcgcccggatcgacgaggacaccgtcctcgtg
cacccgtccgagcgcgggcggctgaagcaggcgctgctgaaggtcggctggccggccgag
gacctcgccgggtacgtggacggcgaagcgcacccgatcgcgctcgacgagcaggactgg
cacctgcgcgactaccagcggatggccgcggaggcgttctgggcgggcggctccggcgtc
gtcgtgctgccgtgcggcgccgggaagacgctggtcggcgcggcggcgatggctcgcgcg
caggccacgacgctgatcctggtgacgaacaccgtcgccgggcggcagtggaagcgcgag
ctgatcgcgcggacgtcgctgaccgaggaggagatcggcgagtactccggcgagaagaag
gagatccggccggtcaccatcgcgacctaccaggtgatcacgcgcaagaccaagggcgag
taccggcacctggagctgttcgactcgcgcgactggggcctggtcgtctacgacgaggtg
cacctgctgccggcgccggtgttccggatgacggcggacctgcagtcccggcggcggctc
ggcctgaccgcgacgctggtgcgcgaagacggccgcgaaggtgacgtcttctcgctgatc
ggcccgaagcgctacgacgtgccgtggcgcgacatcgaggcgcagggctggatcgcgccg
gcggagtgcaccgaggtccgcgtgacgctgaccgacgcggaacgcctggagtacgccacg
gccgaggccgacgagcggtacaagctggccgcgacggcgctgacgaagaccccggtgatc
aagtccatcgtggagaagcacgccggcgagccgaccctggtgatcggggcgtacctcgac
cagctcgagatgctcggcgacgagctcgacgccccggtgatccagggcgcgacccgcaac
aaggagcgcgaagagctgttcgacaagttccgccggggcgagatcaagacgctggtggtg
tcgaaggtcgcgaacttctcgatcgacctgcccgaggcctcggtggcgatccagatctcg
ggaacgttcggctcccgccaggaggaggcccagcggctcggacggctcctgcgcccgaag
ggcgacggccgtcaggcgcacttctattcgatcgtctcgcgcgacacggtcgacacggag
tacgcggcacaccggcagcggttcttggcggagcaggggtacgcgtaccacatcgtggac
gcggacgacctgcttcggccgctctga
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