Amycolatopsis mongoliensis: QRX60_26795
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Entry
QRX60_26795 CDS
T09938
Name
(GenBank) RNA polymerase sigma factor
KO
K03086
RNA polymerase primary sigma factor
Organism
amog
Amycolatopsis mongoliensis
Pathway
amog02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
amog00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
QRX60_26795
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
amog03021
]
QRX60_26795
Transcription machinery [BR:
amog03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
QRX60_26795
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
HTH_20
Motif
Other DBs
NCBI-ProteinID:
WIX97701
UniProt:
A0A9Y2JI34
LinkDB
All DBs
Position
complement(5498965..5500368)
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AA seq
467 aa
AA seq
DB search
MAAARTATRGGTKTATAAGEPAEEAATGTAKPAARKTTTAKKAPAKKAPAKKPATKGAKT
EDGDPDGPGEIDEAELDTPDLSDLEEVEVDVVDETVNDEPDADSADDDDDDDESDEETPA
QRRRGAAADKAAAKSSDNPDFVWDEEESEALRQARKDAELTASADSVRAYLKQIGKVALL
NAEEEVELAKRIEAGLYAAERVRTAEEEGEKLVTQMRRDLKWIVRDGERAKNHLLEANLR
LVVSLAKRYTGRGMAFLDLIQEGNLGLIRAVEKFDYTKGYKFSTYATWWIRQAITRAMAD
QARTIRIPVHMVEVINKLGRIQRELLQDLGREPTPEELAKEMDISPEKVLEIQQYAREPI
SLDQTIGDEGDSQLGDFIEDSEAVVAVDAVSFTLLQDQLQSVLQTLSEREAGVVRLRFGL
TDGQPRTLDEIGQVYGVTRERIRQIESKTMSKLRHPSRSQVLRDYLD
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
gtggcagccgcaagaaccgcaacccgaggcgggacgaagaccgcgaccgcagccggcgag
ccggccgaagaggcagccaccgggacggcgaagccggcggcccgcaagaccaccaccgcc
aagaaggctccggccaagaaggctccggcgaagaagcccgcgaccaagggcgcgaagacc
gaagacggcgatccggacggtcccggtgagatcgacgaagccgaactcgacacgcccgac
ctgtcggacctggaagaggtcgaggtcgacgtcgtcgacgaaacggtcaacgacgaaccg
gacgccgactcggccgacgacgacgatgacgacgacgagtcggacgaggagaccccggcg
cagcgccgccgtggtgccgccgccgacaaggccgccgccaagagctccgacaacccggac
ttcgtctgggacgaggaggagtccgaggcgctgcgtcaggcgcgcaaggacgccgagctc
accgcgtccgccgactcggtccgcgcctacctcaagcagatcggcaaggtcgcgctgctg
aacgcggaggaggaggtggagctggccaagcggatcgaggccgggctctacgccgccgag
cgcgtgcgcaccgccgaggaggagggcgagaagctcgtcacccagatgcgccgcgatctc
aagtggatcgtgcgtgacggcgagcgcgccaagaaccacctgctggaggcgaacctccgg
ctcgtggtgtcgctggccaagcgctacaccggccgcggcatggcgttcctggacctgatc
caggagggcaacctcggcctgatccgcgcggtggagaagttcgactacaccaagggctac
aagttctcgacgtacgccacgtggtggatccgccaggcgatcacccgcgcgatggccgac
caggcccgcaccatccgcatcccggtgcacatggtcgaggtcatcaacaagctcggccgc
atacagcgtgaactgctccaggacctcggccgtgagccgaccccggaagagctcgccaag
gaaatggacatctccccggagaaggtcctggagatccagcagtacgcgcgtgagccgatc
tcgctcgaccagacgatcggcgacgagggcgactcgcagctcggtgacttcatcgaggac
tccgaagcggtcgtcgcggtggacgcagtgtcgttcacgctgctgcaggaccagctccag
tcggtgctgcagacgctgtccgagcgcgaggcgggcgtggtccggctgcgcttcggcctc
acggacggccagccgcgcacgctcgacgagatcggccaggtgtacggggtgacccgcgag
cgcatccggcagatcgagtcgaagacgatgtcgaagctgcgccacccgtcgcggtcccag
gtcctgcgcgactacctggactga
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