Amycolatopsis mongoliensis: QRX60_30375
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Entry
QRX60_30375 CDS
T09938
Name
(GenBank) DNA-formamidopyrimidine glycosylase family protein
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
amog
Amycolatopsis mongoliensis
Pathway
amog03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
amog00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
QRX60_30375
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
amog03400
]
QRX60_30375
Enzymes [BR:
amog01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
QRX60_30375
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
QRX60_30375
DNA repair and recombination proteins [BR:
amog03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
QRX60_30375
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
NFACT_N
MycE_N
Motif
Other DBs
NCBI-ProteinID:
WIX98361
UniProt:
A0A9Y2JJD3
LinkDB
All DBs
Position
6318893..6319705
Genome browser
AA seq
270 aa
AA seq
DB search
MPELPEVEFARSVIERAALGRRITEVDDSDTYVCRPHPPGLLRDALTGRRLVSAHRRGKS
MWCETDGGPVLGVHLGMSGKIVVAGPDGTEADGGDHWEGRRAPGDYGWARFTVTFEDGGR
LMLVDPRRLGRIVLDPALDDLGPDAATIGAGEFRAAVTGGTAAVKARLLDQHAIAGIGNL
LADEILWRARVHPARPVDELDRADVGRLLRATRGAVSAALRHGGVHTLDVVPFRKAGARC
PRDQAPMVRGRAGGRTSWWCGAEQRLPGDA
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
atgcctgagctgcccgaggtggaattcgcccgctcggtgatcgagcgggcggcgctgggc
cggcgcatcaccgaggtcgacgactccgacacgtacgtgtgccgcccgcatccgccgggc
ctgcttcgcgacgcgctcaccggccgacggctcgtgtccgcgcaccggcggggcaagtcg
atgtggtgcgaaaccgacggcgggccggtgctcggagtccacttgggaatgtccggtaag
atcgtggtggccggcccggacggaacggaagccgacggcggcgaccactgggagggccgg
cgcgcgccgggcgactacggctgggcgcgcttcacggtgacgttcgaagacggcggccgg
ctgatgctggtcgacccccgccggctgggccggatcgtgctcgacccggccctggacgac
ctcggcccggacgcggcgacgatcggcgccggcgagttccgcgcggccgtcaccggggga
acggcggccgtcaaggcccgcctgctggaccagcacgcgatcgccgggatcggcaacctg
ctcgcggacgaaatcctgtggcgggcccgggtgcaccccgctcgcccggtggacgagctc
gaccgcgcggacgtcggccggctgctgcgtgccacccggggcgcggtgtccgccgcgctg
cggcacgggggagtccacacgctggacgtcgtcccgttccggaaggccggcgcgcggtgc
ccgcgtgaccaggcgccgatggtgcgggggagagccggcgggcgcaccagttggtggtgc
ggtgcggagcagcggttgcccggtgacgcttga
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