Amycolatopsis mongoliensis: QRX60_36380
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Entry
QRX60_36380 CDS
T09938
Name
(GenBank) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
amog
Amycolatopsis mongoliensis
Pathway
amog00040
Pentose and glucuronate interconversions
amog01100
Metabolic pathways
amog02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
amog00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
QRX60_36380
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
QRX60_36380
Enzymes [BR:
amog01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
QRX60_36380
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GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-ProteinID:
WIX99492
UniProt:
A0A9Y2NHA2
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All DBs
Position
7559522..7560805
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AA seq
427 aa
AA seq
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MRWKAFAGCCALLGLTLTAAPAEADGHEPGRVVLGAHDGWGAATTGTTGGAAAAPGDVHT
VTRRSELAAALAAHPGAPKIVYVRGTIEGDVDARDRPRTCADFADPAYSLPAYLAAYDPA
TWGKVEPSGPLEEARARSQANQAAQVVLDVGPNTTVYGLGGATLHGLTLRVTGDNVILRN
LRFSDAHDCFPEWDPLDGADGNWNSEYDNVDLVGATHVWVSHNEFSDGGNTAQPTYFGRK
YEVHDGLLDIVNGSDYVTVSDNRLHDHDKTMLIGNTDKPAYDVGKLRVTVHHNVFSEIGQ
RAPRVRYGQVHVYDNLYVVRDAAAYTYSLGVGVESRIHAENNFFRIPASVPLGALVHYWK
GTVFHATGTLVSVGSARPRPVDLLAEYNAANDPDLGPDVGWTPALVDRLDPAWAVPTRVL
AGAGPVF
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atgcgctggaaggccttcgcggggtgctgcgccctgctcggactcaccctcaccgccgcg
ccggcggaagccgacggccacgagccgggccgcgtcgtgctcggcgcgcacgacggctgg
ggcgcggcgaccaccgggacgaccgggggagcggccgccgcacccggcgacgtccacacg
gtgacccggcgctcggagctggccgccgcgctggcggcgcacccgggcgcgccgaagatc
gtctacgtccgcggcacgatcgagggcgatgtggacgcccgcgaccggcctcggacctgt
gccgacttcgccgatcccgcctacagcctgcccgcgtacctggcggcctacgacccggcg
acgtggggcaaggtcgagccgtcgggaccgctggaggaggcgcgggcccggtcacaggcc
aaccaggcggcgcaggttgtgctcgacgtcggcccgaacacgacggtctacggcctcggc
ggcgccaccctgcacggcctgaccctgcgcgtcacgggcgacaacgtgatcctgcggaac
ctgcggttttccgacgcgcacgactgctttcctgagtgggaccccctcgacggcgcggac
gggaactggaactccgagtacgacaacgtcgacctcgtcggggcgacgcacgtgtgggtc
agtcacaacgagttcagcgacggcgggaacaccgcgcagcccacgtacttcgggcgcaag
tacgaagtccacgacggactgctggacatcgtcaacggctcggactacgtgacggtgtcg
gacaaccgcctgcacgaccacgacaagacgatgctgatcggcaacaccgacaagccggcc
tacgacgtgggcaagctgcgcgtcaccgtgcaccacaacgtcttttccgagatcgggcag
cgcgcgccgcgggtgcggtacgggcaggtgcacgtgtacgacaacctgtacgtcgtgcgg
gacgcggctgcgtacacgtattcgctgggcgtcggggtcgaatcgcggatccacgcggag
aacaacttcttccggatcccggcgtcggtgccgctgggcgcgctggtccactattggaag
ggaacggtgttccacgcgaccggaacgctggtttcggtgggttcggcgcgcccgcgtccg
gtggacctgctggcggagtacaacgcggcgaacgaccccgacctggggccggacgtgggc
tggacaccggcgctggtggaccggctcgacccggcgtgggccgtgccgacgcgcgtactg
gccggcgccggtcccgttttctga
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