Malaciobacter molluscorum: AMOL_0464
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Entry
AMOL_0464 CDS
T06655
Symbol
mfd
Name
(GenBank) transcription-repair coupling factor
KO
K03723
transcription-repair coupling factor (superfamily II helicase) [EC:
5.6.2.4
]
Organism
amol
Malaciobacter molluscorum
Pathway
amol03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
amol00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AMOL_0464 (mfd)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
amol03400
]
AMOL_0464 (mfd)
Enzymes [BR:
amol01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AMOL_0464 (mfd)
DNA repair and recombination proteins [BR:
amol03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
TRCF (transcription-repair coupling factor)
AMOL_0464 (mfd)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
TRCF
UvrB_inter
CarD_TRCF_RID
ResIII
Cas3-like_C_2
Helicase_RecD
DUF6794
GpA_ATPase
AAA_16
Motif
Other DBs
NCBI-ProteinID:
AXX91480
UniProt:
A0A2G1DGU1
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All DBs
Position
461514..464483
Genome browser
AA seq
989 aa
AA seq
DB search
MKDIFDFFSKKNDCQLIIVNDDKQAQVASDIVSYYGYEAFVLADFRANFGDDLLSFSEEI
QSITKELNGFYNYKKQKKILISPIRTISYAMPKQKCFDTFTINFADTINIEEFKSKLYNW
GYYFVDIVTSQSEVSFRGDIVDICPLGSDIGYRISLFDDEVESIRKFDIEDQKSFKEEIE
SFDISPAFLALDETTFEELNDEVQQVESDAFVKDIHSLGFWYLNDLGEYLPTVMNSYITY
EALDELDEVYVFEEKRIAKEKFLQTPIVPKSKDYKEVDVANINDFLTFHEDKQITIISSS
EAKIKGFDLDLTNSKINYIIKPYIINVVSNDEVIISLNKEIKKRRKKRVKLVLDELQEGD
FVVHEKHGIGKYNGIEPVTVMGAKRDFVIVLYAGDDKLLIPVENLDLIDRYVADGSSYAV
VDKLGKGSFAKLKQKVKDRLFAIANDIIKIAAARELVNGIKINTDKQLLIDFQKSAGFEY
TKDQVRSITEIFEDLSSGKVMDRLLSGDVGFGKTEVAMNAILAILLDGYQAIFVCPTTLL
ATQHYQGMAKRFKEYGITMAKLDGKSTTKEKNHIKKGLESGEIQFVVGTHSLLDVKTKDL
ALVVIDEEHKFGVKQKEKLKALREDVHIFSMSATPIPRTLNLALSKLKGMSSLLTPPHER
LGVRTYVKEYSEKLIKEIILREKRRGGQLFYVHNNIASIEAKRSDIEQIVPNIKVEVIHS
KIKPADAEKIIDAFENKQFDILLATSIVESGLHLPNANSIIIDGADRFGIADLHQLRGRV
GRSDKEGFCYYIVEDKKTITSDAIKRLIALESNSYLGSGTALAHQDLEIRGGGNIIGEAQ
SGHIKQIGYGLYLKMLEDALATLSGEIKEQNKSVDIKLAISAFISSDYIVEDRVRLELYR
RLSKATTKEEVYAIEEEMEDRFGKPDIPTKQFLELILIKIFAINKNIKQISSYEMNITFI
KNDDTKDNIKSPSKDDDDIIATTLKYLRK
NT seq
2970 nt
NT seq
+upstream
nt +downstream
nt
atgaaagatatcttcgattttttttcaaaaaagaatgactgccaattaataatcgtaaat
gatgataaacaagcacaagtagcttcagacatagtatcttactatggatatgaagctttt
gtgctagcagatttcagagccaattttggagatgacttattatcttttagtgaagagatc
caatcaattacaaaagaattaaatggtttttataactataaaaaacagaaaaaaatactt
atttcaccaataagaactatttcatatgcaatgccaaaacagaaatgttttgatacattt
actataaattttgcagatactataaatatagaagaatttaaatcaaaactttacaactgg
ggatattactttgtagatattgtcacttctcaatcagaagtttcatttagaggtgatatt
gttgatatttgtcctttaggaagtgatataggatatagaatttcactttttgatgatgaa
gttgaaagtatcaggaaatttgatatagaagatcaaaaatcttttaaagaagagattgaa
agttttgatataagtcctgcttttttagcacttgatgaaactacatttgaagagttaaat
gatgaagttcaacaagtagaatctgatgcatttgtaaaagatatacactctttaggattt
tggtatttaaatgatttaggtgaatatttaccaactgtgatgaatagttatataacttat
gaagctttagatgaactagatgaagtttatgtatttgaagaaaaaagaattgcaaaagag
aaatttttacaaacaccaatagttccaaagtcaaaagattataaagaagtagatgttgct
aatataaatgattttttaacttttcatgaagataaacaaattacaattatctcatcaagt
gaagcaaaaatcaaaggttttgatttagatttaactaatagtaaaattaattatattata
aaaccttatattataaatgtagttagtaatgatgaagtaataatatctttaaataaagag
ataaaaaaaagaagaaagaaaagagtaaaactagttcttgatgaattacaagagggtgat
tttgttgttcatgaaaaacatggtattggtaaatataatggaatagaacctgttactgta
atgggtgcaaaaagagattttgtaattgttttatatgcaggtgatgataagttactaata
cctgttgaaaatcttgatttaattgatagatatgttgctgatggaagttcttatgctgtt
gttgataaactaggaaaaggaagttttgctaaattaaaacaaaaagtaaaagatagactt
tttgcaattgctaatgatattattaaaatagcagctgcaagagagcttgtaaatggtatt
aaaataaatacagataaacaacttttaatagattttcaaaaaagtgcagggtttgaatac
acaaaagatcaagtcagaagtataacagaaatatttgaagatttaagtagtggtaaagta
atggatagattactttctggtgatgttggatttggtaaaactgaggttgcaatgaatgca
attttagcaatattattagatggttaccaagctatttttgtatgtcctactacacttctt
gcaacacaacattatcaaggaatggctaaaagatttaaagagtatggaattactatggct
aagcttgatgggaaatctacaacaaaagagaaaaaccacataaaaaaaggtttagaaagt
ggtgaaatccagtttgtagtaggaactcactctttacttgatgtaaaaacaaaagattta
gcattagttgtaattgatgaagaacataaatttggagtaaaacaaaaagagaagttaaaa
gcattaagagaggatgttcatattttttcaatgagtgcaacaccaattcctaggacttta
aatttagcacttagtaaattaaaaggaatgagtagtttattaactcctcctcatgaaagg
cttggtgttagaacttatgttaaagagtatagtgaaaaacttataaaagagattatttta
agagaaaaaagaagaggtgggcagcttttttatgttcataataatattgcatcaattgag
gctaaaagaagtgatattgagcaaatagttccaaatatcaaagtagaagtaattcattca
aaaataaaacctgctgatgcagaaaagataattgatgcttttgaaaataagcagtttgat
attttgcttgctacttctattgtagaatcaggacttcatttaccaaatgcaaactcaatt
attattgatggtgcagatagatttggtattgcagatttacatcaattaagaggaagagtt
ggtagaagtgataaagaaggtttttgttactatatagttgaagataaaaaaacaattaca
agtgatgctataaaaagattaattgctttagaatcaaactcttatttaggaagtggtaca
gctcttgctcatcaagatttagaaattagaggtggtggaaatataattggtgaagctcaa
agtggacatattaaacaaattgggtatggattatatttaaaaatgttagaagatgcatta
gctactttaagtggtgaaataaaagaacaaaataaatctgttgatataaaattagcaatt
agtgcatttatttcaagtgattatatagttgaagatagagtaagactagaactttataga
agattaagtaaagcaactacaaaagaagaagtttatgcaattgaagaagagatggaagat
agatttggtaaaccagatattcctacaaaacagtttttagaacttattttgattaaaata
tttgcaataaataaaaatattaaacagatcagttcatatgagatgaatataacttttatt
aaaaatgatgatacaaaagataatataaaatcaccaagtaaagatgatgacgatataata
gcaacaacattgaaatatttaagaaaatag
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