Malaciobacter molluscorum: AMOL_1486
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Entry
AMOL_1486 CDS
T06655
Symbol
pnp
Name
(GenBank) polynucleotide phosphorylase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
amol
Malaciobacter molluscorum
Pathway
amol03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
amol00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AMOL_1486 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
amol03019
]
AMOL_1486 (pnp)
03016 Transfer RNA biogenesis [BR:
amol03016
]
AMOL_1486 (pnp)
Enzymes [BR:
amol01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
AMOL_1486 (pnp)
Messenger RNA biogenesis [BR:
amol03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
AMOL_1486 (pnp)
Transfer RNA biogenesis [BR:
amol03016
]
Prokaryotic type
tRNA degradation factors
AMOL_1486 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
KH_1
PNPase
S1_RRP5
S1_2
KH_2
Motif
Other DBs
NCBI-ProteinID:
AXX92456
UniProt:
A0A2G1DGQ9
LinkDB
All DBs
Position
complement(1496802..1498982)
Genome browser
AA seq
726 aa
AA seq
DB search
MSTVCEFELNGKNEIFEFDKVAKQSNGSVLAQVGNAVVLATVVSEFDNPVEEDFTPLTVQ
YVEKTYAAAKLPGGFIKREAKPSEFETLTSRVIDRSLRPLFPKGYVYPTTITVMVLSADR
DVDLQVLSLNAASAALYTSNLPIKKSVAGVRIGRVEGEYIINPTEIQLEQSTLDLYVAGS
KEELLMIEMKSISSEDMVEVDIEAFTKVHKTNEMEEDELVEAIGLAQNVLNEVNSTYETG
FETVCKEINDVDLVEFTIDESIIENVRNKYINEIKAAIKKLAKSERAVELKEVAKLILEK
EYKDIEEITYSEIYEAVSIVKREIVRNMIVDEKVRADGRGLKEVRPITIETNILPSTHSS
CLFTRGQTQALVIGTIAGPKDGQMYEVLTDKSTSMENFMVHYNFPGFSVGEAKPMFGVGR
RELGHGNLAKKALEATIDKDFDDTIRLVSEILESNGSSSMATVCGGSLALKAAGIPISNL
VAGVAMGMVVQGDKYSILTDIMGLEDHDGDMDFKVAGTKEGITALQMDIKLGGIELSVLK
EALLQAKEGRTHILNIMEEAAVEIVPSDALPLVEQFAIDPSKIMVIIGKAGSTIKEIIEK
FSVSIDLDKDSGKVKVSGENKQNVIDACEHIKTISNNASSRKDSGKNIDFCKLYQLEEVL
KGKVERITDFGAFISLPKGGEGLLHISKISKERVKNVSDVLSVGQEVEIKVLNVKKDRIE
LASTLL
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
atgtcaacagtttgtgaatttgagcttaatggaaaaaatgaaatttttgaatttgataaa
gttgcaaaacagtctaatggatctgttttagcacaagtagggaatgcagttgttttagca
actgtagtaagtgaatttgataatcccgtagaagaagattttactccattaactgttcaa
tatgttgaaaaaacttatgcagctgcaaagttgccaggtggatttattaaaagagaagca
aaaccaagtgaatttgagactttaacttcaagggtaatagataggagtcttagaccactt
tttccaaaaggatatgtatatccaacaacaataactgttatggttttaagtgcagataga
gatgttgacttacaagtacttagtttaaatgcagcaagtgctgctttatatacatctaat
ttaccaattaaaaaatcagttgctggtgttagaataggtagagttgaaggtgaatatata
attaatcctacagaaatacaattagaacaatcaacattagatttatatgtagctggttca
aaagaagaacttttgatgatagaaatgaaatcaatttctagtgaagatatggttgaagta
gatattgaagcttttacaaaagttcataaaactaatgagatggaagaagatgaattagtt
gaagcaataggtttagctcaaaatgtactaaatgaagttaatagtacttatgaaactgga
tttgaaactgtttgtaaagagataaatgatgttgacttagttgagtttactatagatgaa
tctattattgaaaatgttagaaataaatatataaatgaaataaaagcagcaattaaaaaa
cttgcaaaaagtgaaagagctgttgaattaaaagaagttgcaaagcttattctagaaaaa
gaatataaagatattgaagagataacatatagtgaaatttatgaagcagtttcaattgta
aaaagagaaattgtaagaaatatgattgttgatgaaaaagttagagctgatggaagaggt
ttaaaagaagtaagacctataacaattgaaacaaatattttaccttcaacacattcttct
tgtttatttactagaggtcaaactcaagcattagtaattggaacaatagctggaccaaaa
gatggacagatgtatgaagttttaactgataaatctacttctatggaaaattttatggtt
cattataactttccaggtttttcagttggagaagcaaaacctatgtttggagtagggaga
agagagttaggtcatggtaatttagcaaaaaaagctcttgaggcaacaattgataaagac
tttgatgatactataagattagtatctgaaatcttagaatcaaatggttcttcatctatg
gcaacagtttgtggtggttctttagcattaaaagcagcgggaattccaatttctaatctt
gttgctggtgtagcaatgggtatggttgttcaaggtgataaatattctattttaactgat
attatggggcttgaagatcatgatggagatatggattttaaagttgcaggtacaaaagag
ggaattactgcgttacaaatggatattaaacttggaggaatagaactttctgtattaaaa
gaagctttattacaagcaaaagagggaagaactcatattttaaatattatggaagaagct
gctgttgaaatagttccaagtgatgcattacctttagtggaacagtttgcaattgaccct
agtaaaatcatggttattataggtaaagctggttcaactataaaagagataattgaaaaa
ttctcagtttcaattgacctagataaagacagtggaaaggtaaaagtaagtggtgaaaat
aaacaaaatgtaattgatgcttgtgagcatataaaaacaatttctaacaatgcatcatca
agaaaagatagtggcaaaaatattgatttttgtaaactttaccagcttgaagaggtttta
aaaggaaaagtagaaagaataacagattttggtgcatttatatctttaccaaagggtggt
gaaggcttacttcatatatctaagatatcaaaagagagagtaaaaaatgtttctgatgta
ttatctgtaggtcaagaagttgaaattaaagtattaaatgttaagaaagatagaattgaa
ttagcttcaacactattgtaa
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