Paenacidovorax monticola: H9L24_00935
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Entry
H9L24_00935 CDS
T06798
Name
(GenBank) DEAD/DEAH box helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
amon
Paenacidovorax monticola
Pathway
amon03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
amon00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
H9L24_00935
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
amon03019
]
H9L24_00935
Enzymes [BR:
amon01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
H9L24_00935
Messenger RNA biogenesis [BR:
amon03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
H9L24_00935
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
ERCC3_RAD25_C
CMS1
Flavi_DEAD
TniB
Motif
Other DBs
NCBI-ProteinID:
QNP59620
UniProt:
A0A7H0HGF4
LinkDB
All DBs
Position
complement(189574..190833)
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AA seq
419 aa
AA seq
DB search
MPFISLGLSPALAQAASAQGFATPTPIQAQAIPAVLGGADLLAAAQTGSGKTAAFALPLL
QRLQGGTAYTPRRVRALVLVPTRELAAQVGEVLRALAQRLPHPPKVAVVFGGVSINPQMM
GLRGGADVVVATPGRLLDLVEHNALRLSSVRMLVLDEADRLLDLGFAEELQRVLAQLPAA
RQNLFFSATFPPGVQALAEGLLHAPTRVSVPATEASASAIVQRVLQVDARRRTELLRHLV
QEQGWKRVLVFVATQYAAEHVAEKLYQRGIFATPLHGGLSQGARTQVLREFKEERWDVVV
TTDLASRGIDIAQLPVVVNYDLPRSPVDYVHRIGRTGRAGASGLAVSFVSAATEAHFALI
EKRQRLALPREQIAGFEPTEQLPAPTAAPGPGGIKGKRPSKKDKLRAAAQAAAAAKPSP
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgcctttcatttcccttggactctcccccgcgctggcgcaggccgccagcgcgcagggc
ttcgccacgcccacgccgatccaggcccaggccattccggccgtgctgggcggggccgac
ctgctcgcggccgcgcagaccggctcgggcaagacggcggctttcgccctgcccctgctg
caacgcctgcagggcggcacggcgtatacgccccggcgcgtgcgcgcgctggtgctggtg
cccacgcgcgaactcgcggcccaggtcggcgaggtgctgcgcgcgctggcccagcgcctg
ccacacccgcccaaggtagcggtggtgttcggcggcgtgtcgatcaatccgcagatgatg
ggcctgcgcggcggcgccgacgtggtggtggccacgccggggcggctgctcgacctcgtg
gagcacaacgcgctgcggctgtcgtcggtgcgcatgctggtgctcgacgaggccgaccgc
ctgctcgacctgggcttcgcggaggaactgcagcgcgtgctggcccagttgccggccgcg
cggcagaacctgttcttttcggccacattcccccccggcgtgcaggccctggccgagggc
ctgctgcacgcgcccacgcgcgtctcggtgcccgccaccgaggccagcgcgtccgccatc
gtgcagcgcgtgctgcaggtggatgcgcggcgccgcaccgagctgctgcgccacctggtg
caggaacagggctggaagcgggtgctggtcttcgtggcgacccagtacgccgccgagcat
gtggccgagaagctgtaccagcgcggcatcttcgccacgcccctgcacggcggcctgagc
cagggcgcgcgcacccaggtactgcgggaattcaaggaggagcgctgggacgtggtggtg
accaccgacttggcctcgcgcggcatcgacatcgcccagttgcccgtggtggtgaactac
gacctgccgcgctcgccggtggactacgtgcaccgtatcggccgcacgggccgtgcgggc
gcgagcggcctggccgtgagcttcgtgagcgcggccaccgaggcccatttcgcattgatc
gagaaacgccagcgcctcgccctgccgcgcgagcagatcgcgggcttcgagcccacggag
cagctccctgcccccacggccgcgccgggccccggcggcatcaagggcaagcgccccagc
aagaaggacaagctgcgcgctgccgcgcaggccgccgcggcggccaagccctcgccctga
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