Paenacidovorax monticola: H9L24_02130
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Entry
H9L24_02130 CDS
T06798
Symbol
rlmD
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
amon
Paenacidovorax monticola
Brite
KEGG Orthology (KO) [BR:
amon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
amon03009
]
H9L24_02130 (rlmD)
Enzymes [BR:
amon01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
H9L24_02130 (rlmD)
Ribosome biogenesis [BR:
amon03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
H9L24_02130 (rlmD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
RrnaAD
Methyltransf_25
TRM5-TYW2_MTfase
MTS
Methyltransf_11
Methyltransf_23
TRAM
Methyltrans_SAM
Methyltransf_12
PCMT
Motif
Other DBs
NCBI-ProteinID:
QNP59812
UniProt:
A0A7H0HGZ6
LinkDB
All DBs
Position
443539..445011
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AA seq
490 aa
AA seq
DB search
MSDLSDNDILALPTGTPAEAPASSLPEGWLDVLSMDMDAQGVARKPDGKVVFIDGALPTE
WVSANTHRKKNNWEQASLVAIHRESSQRVRPGCPHFGLHAGACGGCKMQHLHVGAQVAVK
QRVLEDNLWHLGKVKAETILRPIEGPAWGYRYRARLSVRYVPKKDKVLVGFHERKSRYIA
DMETCKILPPHVDAMLMPLRALIGSLQARDTCPQIELACGDEVTALVLRHLEPLSDGDLS
KLRAFAVEHGVQWWLQPKGPDTVHLLDQGGPQLAYGLPDFGITMPFKPTDFTQVNPHINR
VLVTRALRLLDAQKTERVIDWFCGLGNFTLPIATQAREVLGIEGSEALVARSRENYKSNQ
AQAVAGRALVATHFVARNLFEMTPEMLVADGRADKWLVDPPREGAFALSKALADIHQARI
GAEDAPALPAGAEGWEPPSRIVYVSCNPATLARDAGLLVHQGGYRCVAAGVVNMFPHTAH
VESMAVFERA
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atgagtgatctgagtgacaacgatatcctggccctccccacgggcacccctgccgaggcg
ccggcctcttcgctgcccgagggctggctcgacgtgctgtccatggacatggatgcccag
ggcgtggcccgcaagcccgatggcaaggtggtcttcatcgacggcgcgctgcccaccgag
tgggtcagcgccaacacccaccgcaagaagaacaactgggagcaggccagcctcgtggcc
atccaccgcgagtcgtcccagcgcgtgcgccctggctgcccgcatttcggcctgcacgcg
ggcgcctgcggcggctgcaagatgcaacatctgcacgtgggggcccaagtggccgtcaag
cagcgcgtgctggaggacaacctctggcacctgggcaaggtcaaggccgagaccatcctg
cgccccatcgagggcccggcctggggctaccgctaccgcgcgcgcctgtcggtgcgctac
gtgcccaagaaggacaaggtgctggtgggcttccacgagcgcaagagccgctacatcgcc
gacatggagacctgcaagatcctgccgccgcatgtggacgccatgctgatgccgctgcgg
gcgctgatcggctcgctgcaggcgcgcgacacctgcccgcagatcgagctggcctgtggc
gacgaggtgacggccctggtgctgcgccacctggagccgctgtccgacggagacctctcc
aagctgcgcgcctttgcggtggagcacggtgtgcaatggtggctgcagcccaaggggccc
gacacggtgcacctgctcgaccagggcggcccgcagctcgcctatggcctgcccgacttc
ggcatcaccatgccgttcaagcccaccgatttcacccaggtcaacccgcacatcaaccgc
gtgctggtcacgcgtgcgctgcgcctgctcgacgcgcaaaagaccgagcgcgtgatcgac
tggttctgcggcctgggcaacttcacgctgcccatcgccacgcaggcgcgcgaggtgctg
ggcatcgagggcagcgaggccctggtggcccgctcgcgcgaaaactacaaatcaaatcag
gctcaggcggtggctggtagagcgctggtagctactcattttgtagcgcgcaacctgttc
gagatgacccccgaaatgctcgtggccgacggccgcgccgacaagtggctggtcgatccg
ccgcgcgaaggcgccttcgcgctttccaaggcgctggccgacatccaccaggcgcgcatc
ggcgccgaggacgcgccggcgctgcctgcgggggctgaaggctgggagccgccttcgcgc
atcgtctacgtgagctgtaacccggccacgctcgcgcgcgatgcgggcctgctggtccac
caggggggctaccgctgcgtggcggcgggggtggtgaacatgttcccgcacacggcccac
gtggagagcatggcagtgttcgaacgggcctga
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