Paenacidovorax monticola: H9L24_07290
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Entry
H9L24_07290 CDS
T06798
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
amon
Paenacidovorax monticola
Pathway
amon03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
amon00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
H9L24_07290 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
amon03021
]
H9L24_07290 (rho)
03019 Messenger RNA biogenesis [BR:
amon03019
]
H9L24_07290 (rho)
Transcription machinery [BR:
amon03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
H9L24_07290 (rho)
Messenger RNA biogenesis [BR:
amon03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
H9L24_07290 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
NACHT
OB_RNB
AAA_25
S1CSD-TOTE-2
Spore_III_AA
AAA
ResIII
Motif
Other DBs
NCBI-ProteinID:
QNP60611
UniProt:
A0A7H0HJ95
LinkDB
All DBs
Position
1533309..1534571
Genome browser
AA seq
420 aa
AA seq
DB search
MHLNELKALHVSEVLKQAEELEIENGGRMRKQELMFAIIKKRAKAGEQVFADGVLEILPD
GFGFLRSPDTSYTASTDDIYISPSQVRRFNLHTGDMIEGEVRTPKDGERYFALTKLDKVN
GGPPEQNKHKVMFENLTPLFPKEQLRLERDIKGEENITGRIIDIIAPIGRGQRALIVAPP
KSGKTVMMQHIAHAITANHPDVHLMVLLVDERPEEVTEMQRSVKGEIIASTFDEPAARHV
HVAEMVIERAKRLVELKKDVVILLDSITRLARAYNNVVPSSGKVLSGGVDSNALQRPKRF
FGAARKVEEGGSLTIIATALVDTGSRMDEVIFEEFKGTGNSELHLNRRLYEKRVFPAIEL
NKSGTRREELLLAPEILQKTRILRQFMYNMDEIESMELMIKNMKATKTNVDFFDMMRRGG
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgcacttaaacgaactcaaggcactgcacgtgtctgaagtcctgaagcaggccgaagag
cttgaaatcgaaaatggcggccgcatgcgcaagcaggagttgatgttcgccatcatcaag
aagcgtgcaaaggccggcgagcaggtgttcgccgacggcgtgctcgaaatcctgcccgat
ggcttcggtttcctgcgcagccccgacaccagctacaccgccagcaccgacgacatctac
atctcgcccagccaggtgcgccgcttcaacctgcacaccggcgacatgatcgagggcgag
gtgcgcacgcccaaggacggcgagcgctacttcgcgctgaccaagctcgacaaggtcaac
ggcggcccgcccgagcagaacaagcacaaggtgatgttcgagaacctcacgccgctgttc
cccaaggaacagctgcgcctggagcgcgacatcaagggcgaggagaacatcaccggccgc
atcatcgacatcatcgcccccatcggccgcggccagcgcgcgctgatcgtcgcgcccccc
aagagcggcaagacggtgatgatgcagcacatcgcccacgcgatcacggccaaccacccc
gacgtgcacctcatggtgctgctggtggacgagcgccccgaggaagtgaccgagatgcag
cgttcggtgaagggcgagatcatcgcctccaccttcgacgagcccgcggcacgccacgtg
catgtggccgagatggtgatcgagcgcgccaagcgcctggtcgaactcaagaaggacgtg
gtgatcctgctggactccatcacccgcctggcccgcgcctacaacaacgtcgtgccctcg
tcgggcaaggtgctgtcgggcggcgtggactccaacgcgctgcagcgccccaagcgcttc
ttcggcgcggcgcgcaaggtcgaggaaggcggctcgctgaccatcatcgccacggccctg
gtcgacaccggcagccgcatggacgaagtgatcttcgaagagttcaagggcacgggcaac
agcgaactgcacctgaaccgccgcctctatgaaaagcgcgtgttccccgccatcgagctg
aacaagagcggcacgcgccgcgaggaactgctgctggcgcccgagatcctgcaaaagacc
cgcatcctgcgccagttcatgtacaacatggacgagatcgagtccatggaactcatgatc
aagaacatgaaggccaccaagaccaatgtggacttcttcgacatgatgcgccgcggcggc
tga
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