KEGG   Paenacidovorax monticola: H9L24_20910
Entry
H9L24_20910       CDS       T06798                                 
Name
(GenBank) DEAD/DEAH box helicase
  KO
K11927  ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
Organism
amon  Paenacidovorax monticola
Pathway
amon03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:amon00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    H9L24_20910
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:amon03019]
    H9L24_20910
Enzymes [BR:amon01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     H9L24_20910
Messenger RNA biogenesis [BR:amon03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     H9L24_20910
SSDB
Motif
Pfam: DEAD Helicase_C ResIII
Other DBs
NCBI-ProteinID: QNP59253
UniProt: A0A7H0HFD7
LinkDB
Position
4396253..4397713
AA seq 486 aa
MTSSFSNLSLAEPLARAVAEMGYESMTPIQAQAIPVVLTGKDVMGAAQTGTGKTAAFSLP
LLQRLLKHENSSTSPARHPVRALVLLPTRELADQVAQQIALYAKYTKLRSTVVFGGMDMK
PQTLELKKGVEVLVATPGRLLDHIEAKNAVLNQVEYVVLDEADRMLDIGFLPDLQRILSY
LPKSRTTLLFSATFSPEIKRLAGSYLQDPITIEVARPNETASTVEQRFYSASDDDKRRAI
RKVLKDREIRQAFVFVNSKLGCARLARSLERDGLRTAALHGDKSQDERLKALDAFKQGNV
DLLVCTDVAARGLDIKDVPAVFNYDVPFNAEDYVHRIGRTGRAGATGLAVTLVSGSDARL
VADIEKLIKKKIEIEAIELDDERPRGRFNEGRRAWQDEDGEARRGADRDRGRSSLSGHGG
APRSFRPAPAPRDPFFDQPYEASAAGAAAPAWEAAARPSAGRGISANIKPKRKVAALFKA
PEPTVQ
NT seq 1461 nt   +upstreamnt  +downstreamnt
atgacaagctctttctccaatttatcgctggccgagccgctggcgcgcgccgtggccgag
atgggctacgagtcgatgacccccatccaggcacaggccattccggtcgtgctgaccggc
aaggacgtgatgggcgcggcgcagaccggcacgggcaagacggcggcgttctcgctgccg
ctgctgcagcgcctgctcaagcacgagaacagctccacctcgcccgcgcgccatcccgtg
cgcgccctggtgctgctgcccacgcgcgagctggccgaccaggttgcccagcagatcgcg
ctgtacgccaaatacaccaagctgcgcagcaccgtggtgttcggcggcatggacatgaag
ccccagacgctggagctcaagaagggcgtggaggtgctcgtggccacgccggggcgcctg
ctggaccatatcgaggccaagaacgcggtgctgaaccaggtcgagtacgtggtgctggac
gaggccgaccgcatgctcgacatcggcttcctgcccgacctgcagcgcatcctgtcatac
ctgcccaagagccgcaccacgctgctgttctcggccacgttctcgcccgagatcaagcgc
ctggccggcagctaccttcaggacccgatcaccatcgaggtcgcgcgccccaacgagacc
gcctcgacggtggagcagcgcttctacagcgccagcgacgacgacaagcgccgtgccatc
cgcaaggtgctcaaggaccgtgagatccgccaggccttcgttttcgtgaacagcaagctt
ggctgtgcgcgcctggcgcgttcgctcgagcgcgacggcctgcgcacggcggcgctgcac
ggcgacaagagccaggacgagcgcctcaaggcgctggacgccttcaagcagggcaacgtg
gacctgctggtctgcaccgacgtggccgcgcgcggcctggacatcaaggatgtgccggcg
gtgttcaactacgacgtgcccttcaatgccgaggactacgtgcaccgcatcggccgcacg
ggccgggcgggcgccacgggcctggccgtgacactggtgtcgggcagcgatgcgcgcctc
gtggccgacatcgaaaagctcatcaagaagaagatcgagatcgaggccatcgagctcgac
gacgagcgcccgcgcggccgcttcaacgaaggccgccgcgcatggcaggacgaagacggc
gaggcgcgccgtggcgcggaccgcgaccgtggccgctcctcgctgtccgggcatggcggc
gcaccgcgctccttccgcccggccccagcgccgcgcgacccgttcttcgaccagccctac
gaggcctcggcagccggggccgcagcccccgcctgggaagccgcagcgcgcccctcggcc
ggccgcggcatctcggccaacatcaagcccaagcgcaaggtggccgcgcttttcaaggca
cccgagcccacggtgcagtaa

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