Anopheles moucheti: 128310357
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Entry
128310357 CDS
T09615
Name
(RefSeq) regulator of nonsense transcripts 1 homolog
KO
K14326
regulator of nonsense transcripts 1 [EC:
5.6.2.5
5.6.2.3
]
Organism
amou
Anopheles moucheti
Pathway
amou03013
Nucleocytoplasmic transport
amou03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
amou00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
128310357
03015 mRNA surveillance pathway
128310357
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
amou03019
]
128310357
Enzymes [BR:
amou01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
128310357
5.6.2.5 RNA 5'-3' helicase
128310357
Messenger RNA biogenesis [BR:
amou03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
128310357
mRNA cycle factors
Common to processing body (P body) and stress granule
128310357
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF1_Zn_bind
AAA_12
AAA_11
UPF1_1B_dom
AAA_19
AAA_30
ResIII
SLFN-g3_helicase
NAT10_TcmA_helicase
NPHP3_N
DEAD
AAA_22
ATPase
nSTAND3
SRP54
AAA_32
AAA_16
AAA_5
Motif
Other DBs
NCBI-GeneID:
128310357
NCBI-ProteinID:
XP_052902939
LinkDB
All DBs
Position
2:1338797..1343583
Genome browser
AA seq
1147 aa
AA seq
DB search
MSVDAYDGTTGSQSLTFVDTEENFFVGADSQGTEYDFRDFTIPSQSQTQASQLEFGRRIG
ADPTKLSGITSAIGELQFEEDEDELDPVENKDLPPHACRYCGIHEPSTVVMCNICKKWFC
NGRGSTSGSHIVNHLVRAKHREVTLHADGPLGETVLECYSCAVRNVFVLGFIPAKSDSVV
VLLCRQPCAAQNSIKDMNWDQEQWKPLIADRCFLFWLVKIPTEQDQLRARKVSAAQINKL
EELWKENVDATFQDLEKPGIDKEPQQVQLRYVDGYQYQNTFGPLVKLEADYDEKLKESQT
QENIEIRWDTGLNKKTIAYFTLAKNDGDMKLMHGDELKLRYVGELHKPWSCIGHVIKVPD
NYGDDVGLELKHNHQAPIERTSNFSVDFIWKGTSFERMQQALRKFAMDAKSVSNYIYTRL
LGNVRADGAEEVLFRLNLPKHFSAPNLPDLNRSQVYAVRHALQRPLSLIQGPPGTGKTVT
SATIVYQLARLNSGPILVCAPSNTAVDQLTEKIHRTNLKVVRVCARSREAIDSPVSFLAL
HNQIRNMAQNSELKKLQQLKDETGELSLSDERRYRSLKKQSERELLEAADVICCTCVGAG
DLRLQRIKFNSILIDESMQSTEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAAKAGLS
QSLFERLVALGIRPFRLEVQYRMHPELSQFPSNFFYEGSLQNGVCADERKLKVDFPWPSL
ECPMFFLVTQGQEEIAGSGTSYLNRTEASNVEKITTRFLKAGIKPEQIGIITPYEGQRAY
LVQYMQYQGSLHSKLYQEIEIASVDAFQGREKDIIIMSCVRANEHQGIGFLNDPRRLNVA
LTRAKYGIIIVGNPKVLAKQELWNHLLNFYKDKKVLVEGSLNNLKESMIQFTKPKKIINT
LNPGSHFMTNAMYDAKEVLGGSYFDRNPGPTSSYAHNPLAGYGNTNTYHQPGGFMEMTNH
GSSNSASANTPLDAFMRKVHDPIGYISPQRSHPAVSNMPVPVGMFINMSNAPSRFYQQQQ
AAAIQAAKQTRRPVVGKTASQLLASGAGSSSGAKPSRPRPIGPPSSSHNTHGINSAGASL
TQGMSQNMSQPGFSLSQQPEFSQDYMGDYQSQMDNILSQESNYHSQSGPGDRLAFELANS
SQFSQPY
NT seq
3444 nt
NT seq
+upstream
nt +downstream
nt
atgagtgtcgatgcttacgacggaacgactggttcccaatcgctgacctttgtcgatacg
gaggagaacttcttcgtcggagccgattcacagggtaccgagtatgactttcgcgacttt
acgataccttcgcaaagtcaaacccaagcctcgcagctcgaattcggacggcgtattggc
gctgatccgacgaagttgtccggcattacttcggccatcggagagctgcagtttgaggag
gatgaggatgagctggacccagtggagaataaggatcttcctccacatgcgtgtcgttac
tgtggtatacacgagcctagtactgtggtgatgtgtaatatctgcaaaaaatggttctgt
aacggacgcggaagcacgtccggatcacacattgtgaatcatctcgtacgggccaaacat
cgggaagtcacgctgcacgcggacggtcccctaggcgagacagtcctggagtgttattct
tgcgccgttcggaacgtgtttgtgctcggattcattcccgccaaaagcgactcggtcgtt
gtgctgttgtgcagacaaccatgtgccgcacagaattccatcaaggacatgaactgggac
caggaacaatggaaaccactgatcgcagatcgttgtttcctgttttggttggtaaagatc
ccaaccgagcaggatcagttgcgtgcgcgcaaagtgtccgcggctcaaattaacaagctg
gaagagctgtggaaagaaaacgttgacgcaacgttccaggatctggagaagccaggcatc
gacaaggaaccacaacaggtgcagttgcgttacgtcgatgggtatcagtatcaaaatacg
ttcggaccactagtgaagctggaagcggattatgatgaaaaattaaaggaaagtcaaacg
caggagaacattgaaattcgatgggatacgggccttaacaagaaaacgatcgcttatttc
acgctggcgaagaatgacggagatatgaagctgatgcacggggatgaactgaagctgcgc
tacgtcggagagctgcacaagccgtggagttgcattggacatgtgattaaggtgccggac
aactatggtgacgatgttggcttagagctgaaacacaaccatcaggcaccgatagagcgc
accagtaacttctcggtagatttcatctggaaaggcacgtcgttcgaacggatgcaacaa
gcattgcgcaagtttgcgatggatgccaaaagcgtttcgaattacatttacacccgattg
cttggaaatgttcgggccgatggtgctgaggaagtgctgtttaggttgaatttgcccaaa
cacttcagtgcccccaatctccccgatcttaaccggtctcaggtgtatgcggttcggcac
gcactgcaacgtccattgagcctgatccaaggtccgcccggaactggaaagacagtcacc
tcggccacaattgtgtaccaactggcgcgtcttaacagtggaccaatcttagtgtgcgct
ccgagcaacactgcggtcgatcagctgacggaaaaaatacaccgtaccaatctgaaggta
gtgcgtgtgtgtgcacggtcgcgcgaagcgatcgactcgccggtcagctttctggcgttg
cacaatcaaatccgcaatatggcacaaaactcggaattgaaaaaattgcagcaattaaag
gatgaaactggtgaactgagtctttcggatgaacgccgttatcggtcgttgaaaaagcaa
tcagaacgtgaactgttggaagcggccgatgtcatttgctgtacctgcgtaggagcgggt
gatcttcgtttgcagcgcatcaagttcaattccatcttgattgacgaatcgatgcagtca
accgagccagagtgtatggtaccggtggtgttgggagccaaacagctcatcctggttggt
gatcactgtcagctgggtccggtagtgatgtgtaagaaggcggctaaggcaggtttgtcg
caaagtctgttcgaacggttggtggctcttggcattcgtccctttaggcttgaggtgcag
tacagaatgcatccggagctctcacagtttccgtcgaacttcttctacgagggcagtctt
caaaacggtgtatgtgcggatgagcgcaagcttaaagttgatttcccatggccctcgctg
gagtgtccgatgtttttcctcgtcactcagggacaggaagaaatcgcaggatcaggtaca
tcataccttaaccgcacggaggcatccaatgtggaaaaaataactactcgattcctgaag
gctggcataaagccggaacaaatcggtatcattacgccgtacgaaggacagcgagcgtac
ctggttcagtacatgcagtatcaaggctcattgcactcgaagctgtaccaggaaattgaa
atagccagcgtggatgcttttcaaggtcgagagaaggatatcattatcatgtcctgtgta
cgtgcgaatgaacaccagggtatagggtttctgaacgatccacgccggttgaacgttgcg
ctgactcgtgccaaatatggtatcattattgtcggcaatccaaaggtgcttgccaaacag
gagctttggaaccatctactgaacttctacaaggacaaaaaggtgctggtggaaggatcg
ctcaacaatctgaaggaatcgatgattcagttcaccaaaccgaaaaagattatcaataca
ctgaaccccgggtcacatttcatgaccaacgccatgtatgacgccaaggaggtcctgggc
ggtagttatttcgatcgtaatcctggtcctacatcaagttatgcacacaatccgctcgca
ggatacggtaacacaaatacctatcaccagccgggtggatttatggagatgaccaaccat
ggcagcagtaacagcgccagcgccaatacaccgcttgatgcgttcatgcgcaaagttcac
gatccgatcggttacatttcaccccaacgttcacatcccgccgttagcaatatgccggtc
ccggtgggaatgttcatcaatatgtcgaacgccccatcacgtttttatcaacagcaacag
gcagcagcaattcaagcggccaaacaaacgcgtcgcccagtggtaggaaaaactgctagc
caattgctagcttccggtgcggggtcaagctccggtgctaaaccgagtcgcccgcgtcca
atagggccacctagtagcagccacaatacccacgggataaacagtgcaggtgcttcgctt
acccagggcatgtcgcagaatatgtcccaacctggcttcagtctgtcgcagcaaccagaa
ttttcccaggactatatgggtgactatcagtcgcaaatggacaacatactatcgcaagaa
tcaaactatcacagccaatctggaccgggtgatcgtttggcgttcgaactggcaaatagt
tcccaattctcccaaccgtactga
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