Anaplasma marginale Gypsy Plains: U128_00545
Help
Entry
U128_00545 CDS
T02900
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
amp
Anaplasma marginale Gypsy Plains
Brite
KEGG Orthology (KO) [BR:
amp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
amp03016
]
U128_00545
Enzymes [BR:
amp01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
U128_00545
Transfer RNA biogenesis [BR:
amp03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
U128_00545
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNAseD_HRDC_C
Motif
Other DBs
NCBI-ProteinID:
AGZ78571
LinkDB
All DBs
Position
129161..130321
Genome browser
AA seq
386 aa
AA seq
DB search
MSAAVLVCSTNELAQFCAQILRDRPESLAIDTEFVRSFNDYYPRLCLLQMAYQGGQCVVD
VLDERLDLSPLQEIFDDEGIYKVFHDCRQDLDALSQRFTRLPRPIFDTQTASMLCEYHDN
SVGYSKLVEQFLGVKLNKLLFKRVDWSHRPLSEGKVRYALDDVTYLHELYEVLLGILTAK
ERLTWFLEEMENIAEAFVDNYDSLLEGMDFFPELGESEAIIARSIIEWREKVARLFNVNR
NIVMHSKSVLLATKDFLRSRDEEVLYRYVSGSYLGNLPFSLCDILESSAGRKLGVYKLVD
RDKPMLSALLILLNSMCREHGISQKLVASKVELVKLINKIHSNIMHGWRYEFFGRKVEKF
IAGETRLIFSVDNSGGQMRLTVDTKA
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcggcggtgttggtttgctcgactaatgagttggcgcagttctgcgcacaaata
ttgcgtgataggccggagagtttggccatagatacggaattcgttagaagttttaatgac
tactacccaaggctttgtttgttgcagatggcatatcaaggtgggcaatgtgtggttgat
gtgttggatgaacggctggacctctccccgctgcaggaaatttttgacgatgaaggtatc
tataaggtctttcacgattgccgccaggatttagacgccctatcacagcggttcacgcgc
cttcctaggccaatttttgacactcaaacggcttcaatgctatgcgaatatcatgataat
tctgtaggatactccaagcttgtagagcaatttttgggcgtgaagctcaataagctgctg
ttcaaaagggttgattggtcacacaggccactgtccgaaggcaaagtgcgttacgctctg
gatgatgtgacttacctgcacgagctttatgaggtgctgcttggcattttgaccgccaag
gaacggcttacatggtttcttgaagagatggaaaacattgctgaggcatttgtggataac
tatgactccctgctggagggcatggatttcttccccgaacttggggagtcggaagccata
attgccaggtccataattgagtggagggaaaaagtggccaggctgtttaatgttaatcgc
aatatcgtgatgcattccaagagcgtactcctcgcaacaaaagactttcttcgaagcaga
gacgaggaagtattatataggtacgttagcgggtcttacttgggcaacttgccatttagc
ctgtgcgacatattagagagcagtgccggacggaagctgggagtatacaaactggtagac
cgcgacaagcccatgctgagtgcgttgcttattttactcaacagcatgtgcagggagcat
ggaatctcgcaaaagttggttgcttcaaaagttgagcttgtgaaactaatcaacaaaata
catagcaacataatgcacggctggcggtacgagtttttcggacgcaaagttgaaaaattt
attgcgggagagaccagactcattttttctgtcgataattctggcgggcagatgcggttg
actgtcgatacaaaagcgtaa
DBGET
integrated database retrieval system
