Amycolatopsis methanolica: AMETH_0007
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Entry
AMETH_0007 CDS
T03230
Symbol
recF
Name
(GenBank) DNA replication and repair protein RecF
KO
K03629
DNA replication and repair protein RecF
Organism
amq
Amycolatopsis methanolica
Pathway
amq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
amq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
AMETH_0007 (recF)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
amq03400
]
AMETH_0007 (recF)
DNA repair and recombination proteins [BR:
amq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
AMETH_0007 (recF)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_15
AAA_21
AAA_29
ABC_tran
SbcC_Walker_B
Motif
Other DBs
NCBI-ProteinID:
AIJ20099
UniProt:
A0A076MHG3
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Position
6032..7189
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AA seq
385 aa
AA seq
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MHIRHLQVTDFRSWEHADLPLTPGPTVLVGQNGRGKTNLLEAIGYLATLGSHRVATDAPL
VRHGCERALVRAAVVNEDRELTVELEINPGRANRARVNRGAVGKPRDILGILRTVLFSPE
DLALVRGDPGERRRFMDELLVQRAPRYAGVRADYERILKQRNALLKTAGKKKGAARDDPY
ALSTLEVWDNHLSVVGAQLLAARLDLVADLGPHTTAAYAGVAPDSRPAKISYRSSLGAAL
PEGYGVPDGKRAEPEVLTGILVEAMAQVRQQELERGISLVGPHRDELEIVLGEAPAKGYA
SHGESWSFALALRLASYELLRREAGEPVLLLDDVFAELDRRRRSRLAEVAAGAEQVLVTA
AVDEDVPEELAGVRFTVADGEVRSA
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
gtgcacatacggcacctgcaggtcaccgacttccgttcctgggagcatgctgacctgccg
ctcacccccggaccgacggtcctcgtcggccagaacggccgtgggaagaccaacctgctg
gaggcgatcggctacctggcgaccctcgggtcgcaccgggtcgcgacggacgccccgctg
gtgcggcacggatgtgagcgggcactcgtgcgggcggccgtggtcaacgaggaccgcgag
ctgaccgtcgagctggagatcaaccccggccgggcgaaccgcgccagggtcaaccggggg
gcggtcggcaagccgcgggacatcctcgggatcctgcgcaccgtgttgttctccccggag
gacctggcgctggtgcgtggcgaccccggcgagcgccgccggttcatggacgagctgctg
gtgcagcgcgcaccccggtacgcgggggtgcgcgccgactacgagcggatcctcaagcag
cgcaacgcgttgttgaagacggcgggcaagaagaagggcgccgcgcgcgacgacccgtac
gcgctgtcgaccctggaggtgtgggacaaccacctctcggtggtcggcgcccagctgctc
gccgcccggctggacctggtcgccgacctcgggccgcacaccaccgcggcctacgccggg
gtggcgcccgactcgcggccggccaagatctcctaccggtccagcctgggcgcggcactg
cccgaggggtacggggttccggacgggaaacgcgccgaaccggaggtcctcaccggtatc
ctggtggaggcgatggcgcaggtgcggcagcaggagctggaacgggggatcagcctggtc
gggccgcaccgcgacgagctggaaatcgtcctcggggaggcccctgcgaagggctacgcg
agccatggggaatcctggtcgttcgccctcgcgctgcggctggcgtcctacgagctgctg
cggcgggaagcgggtgaaccggtgctcctgctcgacgacgtcttcgccgagctcgaccgg
cggcgccggtcgcggctggccgaggtggccgccggcgctgaacaggtgctggtcaccgcg
gcggtggacgaggacgtccccgaggaactggccggggtccggttcaccgtcgccgacggg
gaggtgcgcagtgcctga
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