Amycolatopsis methanolica: AMETH_0330
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Entry
AMETH_0330 CDS
T03230
Symbol
gabD
Name
(GenBank) succinate semialdehyde dehydrogenase
KO
K00135
succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:
1.2.1.16
1.2.1.79
1.2.1.20
]
Organism
amq
Amycolatopsis methanolica
Pathway
amq00250
Alanine, aspartate and glutamate metabolism
amq00310
Lysine degradation
amq00350
Tyrosine metabolism
amq00650
Butanoate metabolism
amq00760
Nicotinate and nicotinamide metabolism
amq01100
Metabolic pathways
amq01120
Microbial metabolism in diverse environments
Module
amq_M00027
GABA (gamma-Aminobutyrate) shunt
Brite
KEGG Orthology (KO) [BR:
amq00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
AMETH_0330 (gabD)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
AMETH_0330 (gabD)
00310 Lysine degradation
AMETH_0330 (gabD)
00350 Tyrosine metabolism
AMETH_0330 (gabD)
09108 Metabolism of cofactors and vitamins
00760 Nicotinate and nicotinamide metabolism
AMETH_0330 (gabD)
Enzymes [BR:
amq01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.1 With NAD+ or NADP+ as acceptor
1.2.1.16 succinate-semialdehyde dehydrogenase [NAD(P)+]
AMETH_0330 (gabD)
1.2.1.20 glutarate-semialdehyde dehydrogenase
AMETH_0330 (gabD)
1.2.1.79 succinate-semialdehyde dehydrogenase (NADP+)
AMETH_0330 (gabD)
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Motif
Pfam:
Aldedh
Motif
Other DBs
NCBI-ProteinID:
AIJ20422
UniProt:
A0A076MRJ8
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Position
complement(331927..333378)
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AA seq
483 aa
AA seq
DB search
MTLDGVPRQIFLAGEWRDAADGSRFGVQDPGTGQQLCEVADAKDADVGEAIEAAVAKQEE
WAATPPRERGEILRRAWQLMTDRADELARLMTLEMGKSLAESKAEVTYAAEFFRWFSEEA
VRIDGRYARSPAGGGRVLVSKHPVGPCILVTPWNFPLAMGTRKIGPAVAAGCTMIVKPAQ
LTPLSMLNLAGLLKDAGLPDGVLSVLPSTSASRVVNPALADPRIRKLSFTGSTEVGRKLV
EQCAPNLQRMSMELGGNAPFLMFEDADLDAAVKGAVTAKMRNNGESCVAANRFHVHSSVA
GEFGRQLTEAMSSLKVGHGTEDGVKVGPLISAEQRDKVVELVEDALSRGAHATTGGKALD
GDGFFYAPTVLTDVPPDARILREEVFGPVAPVTTFEDEDEAVRLANDTEFGLVAYVFTRD
LDRAIRVGERMATGMVGLNTGLVSNASAPFGGVKASGFGREGGAEGIEEYLDVKYMALSL
NGS
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atgaccctcgatggagtaccgcgtcagatcttcctcgccggtgagtggcgtgacgccgcg
gacggcagccgcttcggcgtacaggacccggggaccgggcagcagctctgcgaggtcgcc
gacgcaaaggacgcagatgtcggcgaagccatcgaggcggccgtcgcgaagcaggaggag
tgggccgcgacgccaccgcgggagcggggcgagatcctgcgccgagcgtggcagctgatg
accgaccgcgccgacgagctggcgcggctgatgacgctggagatgggcaagagcctggcg
gagtcgaaggccgaggtcacctacgccgcggagttcttccggtggttctcggaggaggcc
gtgcgcatcgacgggcggtacgcgcgcagcccagccggtggcggtcgggtgctggtgtcg
aagcacccggtggggccgtgcatcctggtcacgccgtggaacttcccgctggcgatgggc
acccgcaagatcgggcccgccgtcgccgccggctgcaccatgatcgtcaagcctgcgcag
ctgacgccgttgtcgatgctgaacctcgccgggttgctgaaggatgccgggctgccggac
ggtgtgctgagcgtgctgccgagcacgtcggcgagccgagtggtgaacccggcgctggcc
gacccgcggatccggaagctgtccttcaccgggtccaccgaggtcgggcgcaagctggtc
gagcagtgcgcgccgaacctccagcggatgtcgatggaactgggcggcaacgcgccgttc
ctgatgttcgaggacgcggacctcgacgcggcggtcaagggcgcggtcaccgcgaagatg
cgcaacaacggcgagtcgtgtgtggcggcgaaccggttccacgtgcactcgtcggtggcc
ggggagttcgggcggcagctgaccgaggcgatgtcgtcgctgaaggtcgggcacggcacc
gaggacggcgtgaaggtggggccgctgatcagcgccgagcagcgggacaaggtcgtcgag
ctggtcgaggacgcgttgtcccgcggcgcgcacgcgaccaccggcggcaaggccttggac
ggcgacggcttcttctacgcgccgaccgtgctcaccgacgtcccgccggacgcgcgcatc
ctgcgtgaggaggtgttcgggccggtcgcgccggtgaccaccttcgaggacgaggacgag
gccgtccggctcgccaacgacaccgagttcgggctggtggcctacgttttcacgcgggac
ctcgaccgggcgatccgcgtcggcgagcggatggcgaccgggatggtcggcctcaacacc
gggctggtgtcgaacgcgtcggcgcccttcggcggtgtgaaggcgtccgggttcggccgc
gagggcggcgccgaaggcatcgaggagtacctcgacgtgaagtacatggcactgtcgctc
aacggaagctga
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