Amycolatopsis methanolica: AMETH_0728
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Entry
AMETH_0728 CDS
T03230
Symbol
groE
Name
(GenBank) 60 kDa chaperonin
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
amq
Amycolatopsis methanolica
Pathway
amq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
amq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AMETH_0728 (groE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
amq03019
]
AMETH_0728 (groE)
03110 Chaperones and folding catalysts [BR:
amq03110
]
AMETH_0728 (groE)
03029 Mitochondrial biogenesis [BR:
amq03029
]
AMETH_0728 (groE)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
amq04147
]
AMETH_0728 (groE)
Enzymes [BR:
amq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
AMETH_0728 (groE)
Messenger RNA biogenesis [BR:
amq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
AMETH_0728 (groE)
Chaperones and folding catalysts [BR:
amq03110
]
Heat shock proteins
HSP60 / Chaperonin
AMETH_0728 (groE)
Mitochondrial biogenesis [BR:
amq03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
AMETH_0728 (groE)
Exosome [BR:
amq04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
AMETH_0728 (groE)
Exosomal proteins of other body fluids (saliva and urine)
AMETH_0728 (groE)
Exosomal proteins of breast cancer cells
AMETH_0728 (groE)
Exosomal proteins of colorectal cancer cells
AMETH_0728 (groE)
Exosomal proteins of bladder cancer cells
AMETH_0728 (groE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
AIJ20820
UniProt:
A0A076MPQ0
LinkDB
All DBs
Position
731883..733499
Genome browser
AA seq
538 aa
AA seq
DB search
MPKQINFDEDARRALERGVNKLADAVKVTLGPRGRHVVLDKKFGGPTITLDGVTVAREIE
LEDPFENLGAQLAKNVATKTNDVAGDGTTTATVLAQSLVKVGLRNVAAGANPAGLGKGIE
AAAEKVIEVLKSKATPVKGRDNIAQVGTVTSRDATIGALLGEAVERVGEDGVITVEESST
LATELEITEGVQFDKGYLSAHFATDPEEQRAILENAYVLLHREKISALADLLPILEKVAE
SKKPLLIIAEDVEGEALSTLVVNALRKTLVAVAVKAPFFGDRRKAFLDDLAVVTGAQVIS
SEVGLKLSEIGLDSLGTARRIEITKDNTTIVDGAGTKADIEARIAQIRKEIETTDSDWDR
EKLQERLAKLGGGVAVIKVGAATETELNERKHRIEDAVASTKAAVEEGIVPGGGSAIVHA
VKELEGDLGLTGDEATGVRIVRDALTAPLNWIAANAGYEGPVIVSKVQEQGWGYGFNAAT
GEITDLLQAGIVDPVKVTRSAVANAASIARLVLTTESTVVDKPVEEPENTGHGHGHAH
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atgcccaagcagatcaacttcgacgaggacgctcgtcgagccctcgagcgcggcgtcaac
aagctcgccgacgcggtcaaggtcaccctcggcccgcgcggtcgccacgtcgtgctggac
aagaagttcggcggcccgacgatcaccctcgacggcgtcaccgtcgcgcgggagatcgag
ctggaggacccgttcgagaacctgggtgcccagctggccaagaacgtggccaccaagacc
aacgacgtcgccggcgacggcaccaccacggccaccgtgctggcgcagtctctggtgaag
gtcggcctccgcaacgtggccgccggcgccaacccggccggcctcggcaagggcatcgag
gcggccgcggagaaggtcatcgaggtgctcaagtccaaggccaccccggtcaagggccgc
gacaacatcgcccaggtcggcacggtcacctcccgtgacgccaccatcggcgccctgctc
ggcgaggccgtggagcgggtcggcgaggacggtgtgatcaccgtggaggagtcctccacg
ctggccaccgaactcgagatcaccgagggtgtgcagttcgacaagggctacctgtcggcg
cacttcgcgaccgacccggaggagcagcgggcgatcctcgagaacgcctacgtgctgctg
caccgcgagaagatctcggcgctggccgacctgctgccgatcctggagaaggtcgccgag
tcgaagaagccgctgctgatcatcgccgaggacgtcgagggcgaggcgctgtccaccctg
gtggtcaacgccctgcgcaagaccctcgtcgcggtcgcggtcaaggccccgttcttcggt
gaccgccgcaaggcgttcctggacgacctggccgtcgtcaccggcgcgcaggtcatctcc
tcggaggtcggcctgaagctgtccgagatcggtctcgactcgctgggcaccgcccggcgc
atcgagatcaccaaggacaacacgacgatcgtcgacggcgccggcaccaaggccgacatc
gaggcccgcatcgcgcagatccgcaaggagatcgagaccaccgactccgactgggaccgc
gagaagctgcaggagcggctggcgaagctcggcggcggtgtcgcggtgatcaaggtcggc
gcggccaccgagaccgagctgaacgagcgcaagcaccgcatcgaggacgccgtggcttcg
accaaggcggccgtcgaggagggcatcgtgcccggcggcggctcggcgatcgtgcacgcg
gtcaaggagctcgaaggcgacctcggcctgaccggcgacgaggccacgggtgtccgcatc
gtgcgcgacgccctgaccgcgccgctgaactggatcgccgcgaacgccggctacgagggc
ccggtcatcgtgtccaaggtgcaggagcagggctggggctacggcttcaacgccgccacc
ggcgagatcaccgacctgctgcaggccggcatcgtcgacccggtgaaggtgacccgctcc
gcggtcgcgaacgcggcctccatcgcccgtctcgtcctgaccacggagagcaccgtggtg
gacaagccggtcgaggagcccgagaacaccggccacggccacggccacgcgcactag
DBGET
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