Amycolatopsis methanolica: AMETH_0762
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Entry
AMETH_0762 CDS
T03230
Symbol
uvrD
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
amq
Amycolatopsis methanolica
Pathway
amq03420
Nucleotide excision repair
amq03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
amq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AMETH_0762 (uvrD)
03430 Mismatch repair
AMETH_0762 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
amq03400
]
AMETH_0762 (uvrD)
Enzymes [BR:
amq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AMETH_0762 (uvrD)
DNA repair and recombination proteins [BR:
amq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AMETH_0762 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
AMETH_0762 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
AAA_11
Motif
Other DBs
NCBI-ProteinID:
AIJ20854
UniProt:
A0A076MJC2
LinkDB
All DBs
Position
767758..770163
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AA seq
801 aa
AA seq
DB search
MSTLFDLPAEPPARPAPGRHADLLADLNPAQREAVTHAGAPLLVVAGAGSGKTRVLTRRI
AYLLAERGVHPGEIMAITFTNKAAAEMRERVSDLVGRRANAMWVSTFHSMCVRLLRREAK
TLDMSSNFSIYDADDTRRLVTLVARDLDVDPKRYPARALAVHISNHKNELTDPEDAAAKA
SNDLERRVAEVYAEYQRRLRLANAFDFDDLIMRTVELFQAFPDVAEHYRRRFRHVLVDEY
QDTNHAQYTLVRELVGTSTSESGAEPAELCVVGDADQSIYAFRGATIRNIEEFERDFPDA
RTILLEQNYRSTQTILSAANAVIARNPNRRDKRLWTDSGDGEKIGVYVADNEHDEAAFVA
GEIDALVDQGQAKYSDVAVFYRTNNQSRVFEEIFIRLGLPYRVVGGVRFYERREVRDALA
YLRVLANPEDTVSLRRILNVPKRGIGDRAEACVATHAERERISFAAALRDAAAGRVALLN
PRSAKAIAGFVELLDGLIELVDSGAEVADVLEAVLERTGYRAELEESDDPQDASRVDNLT
ELITVAREFTEQAAEMAPLAEDDDGVPEPGSLAAFLERVSLVADADSVPTPDEDGEEEDS
GVVTLMTVHTAKGLEYPVVFCTGWEDGVFPHLRALGEPAELAEERRLAYVAITRARQRLY
LSRAITRSAWGQPMTNPASRFFDEVPSELLDWRREEPSSAAESSFGSPRAATTWGRRSRF
GEDSAQAGIAARGMRSTPFKGWQNTVALKLEVGDRVNHDKYGLGTVVEASGEGPRATATI
DFGSAGKVKLMLIGSVPMVKL
NT seq
2406 nt
NT seq
+upstream
nt +downstream
nt
atgagcaccctgttcgacctccccgccgagccgcccgcgcgcccagcgccgggccgccac
gccgacctgctcgccgacctcaatcccgcgcagcgggaggcggtcacgcacgcgggcgcg
cccctgctggtcgtggcgggcgccgggtcgggcaagacccgggtgctgacccgccggatc
gcctacctgctggccgaacgcggcgtgcaccccggcgagatcatggcgatcacgttcacc
aacaaggccgcggccgagatgcgcgagcgcgtcagcgacctcgtcggcaggcgggccaac
gcgatgtgggtctccacgttccactcgatgtgcgtgcggctgctgcgccgcgaggccaag
acgctggacatgtcgtcgaacttctcgatctacgacgccgacgacacgcggcggctggtc
acgctcgtggcgcgcgacctggacgtcgaccccaagcgctacccggcccgcgcgctggcc
gtgcacatctccaatcacaagaacgagctgaccgacccggaggacgccgcggcgaaggcg
tccaacgacctggagcgccgcgtcgccgaggtctacgccgagtaccagcggcggctgcgg
ctggccaacgcgttcgacttcgacgacctgatcatgcgcaccgtcgagctgttccaggcc
ttcccggacgtggccgagcactaccgccgccggttccggcacgtgctggtcgacgagtac
caggacaccaaccacgcccagtacacgctggtgcgggagctcgtcggcacgtcgacgagc
gagtccggggccgagcctgcggagctgtgcgtggtcggtgacgccgaccagtcgatctac
gccttccgcggcgccacgatccgcaacatcgaggagttcgagcgggacttcccggacgcc
cgcacgatcctgctggagcagaactaccgctccacccagaccatcctgtccgcggccaac
gcggtcatcgcgcggaaccccaaccgccgggacaagcggttgtggaccgactcgggtgac
ggcgagaagatcggcgtgtacgtcgccgacaacgagcacgacgaggcggcgttcgtcgct
ggcgagatcgacgcgctggtcgaccagggccaggcgaagtactccgacgtcgcggtcttc
taccgcacgaacaaccagtcccgggtgttcgaggagatattcatccggctcggcctgccc
taccgggtggtcggcggcgtccggttctacgagcgtcgcgaggtccgggacgcgctggcc
tacctgcgggtgctggccaacccggaggacacggtcagcctgcgccgcatcctgaacgtg
cccaagcggggcatcggcgaccgggccgaggcgtgcgtggccacgcacgccgagcgcgag
cggatctccttcgcggccgcgctgcgcgacgccgcggcgggccgggtggcgctgctcaac
ccgcgctcggccaaggcgatcgccgggttcgtcgagctgctcgacgggctgatcgagctg
gtcgacagcggcgccgaggtcgcggacgtgctcgaagcggtgctggagcgcaccgggtac
cgggccgagctggaagagtccgacgacccgcaggacgcctcgcgcgtggacaacctgacc
gagctcatcaccgtcgcccgcgagttcacggagcaggcggccgagatggcgccgctcgcc
gaggacgacgacggggtgcccgagccgggctcgctggcggcgttcctggagcgggtgtcg
ctcgtcgcggacgccgattcggtgccgacgccggacgaggacggcgaggaagaggactcc
ggcgtggtcacgctgatgaccgtgcacaccgcaaaggggttggagtacccggtcgtgttc
tgcaccggctgggaggacggggtgttcccgcacctgcgtgcgctgggcgagcccgccgag
ctggcggaggagcggcggctggcgtacgtggcgatcacgcgggcgcggcagcggttgtac
ctgagccgggcgatcaccaggtccgcgtgggggcagccgatgacgaacccggcgtcccgg
ttcttcgacgaggtgccgtccgagctgctcgactggcgccgcgaggagccgtcgtccgcc
gccgagtcgtccttcgggtccccgcgtgccgcgaccacctggggccgccgctcgcgcttc
ggcgaggattccgcgcaggcaggcatcgcggcccgcggcatgcggtcgacgccgttcaag
ggctggcagaacacggtcgcgctgaagctcgaggtgggcgaccgggtcaaccacgacaag
tacgggctcggcacggtggtcgaagcctccggcgagggcccccgcgccacggcgacgatc
gatttcggcagtgcgggcaaggtgaagctgatgctgatcggcagcgtgccgatggtgaag
ctgtag
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