Amycolatopsis methanolica: AMETH_1026
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Entry
AMETH_1026 CDS
T03230
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
amq
Amycolatopsis methanolica
Pathway
amq03420
Nucleotide excision repair
amq03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
amq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AMETH_1026
03430 Mismatch repair
AMETH_1026
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
amq03400
]
AMETH_1026
Enzymes [BR:
amq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AMETH_1026
DNA repair and recombination proteins [BR:
amq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AMETH_1026
MMR (mismatch excision repair)
Other MMR factors
AMETH_1026
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PDDEXK_1
AAA_19
UvrD_C_2
AAA_30
Replic_Relax
NYN
Motif
Other DBs
NCBI-ProteinID:
AIJ21118
UniProt:
A0A076MJX2
LinkDB
All DBs
Position
1036553..1039771
Genome browser
AA seq
1072 aa
AA seq
DB search
MTEIASPAEVAHALGLHPPTPEQAAVIAAPIEPALVVAGAGAGKTETMAARVVWLVANGF
VTPERVLGLTFTRKAARQLADRVRARLRRLAGSGLLDRLDPGGARRAAVVAGEPTVLTYH
AYAGRLLAEHGLRLPVQPGVRLLSETSSWQLAHRVVSTWDEDLDTDRVPASVTAQLLALT
GELGEHLVTEEQLAEYTRWLCDLIERAPRAKGQRAAMPKSLTDIVAAQKFRLSLIPLIEE
YQRRKRAEGALDFADQMSLAATLADNHPAVAEGERARYGAVLLDEYQDTGHAQRILLRAL
FGGVENEPLPVTAVGDPAQAIYGWRGASAANLPRFTTDFPRPGRQPAREYGLLTSFRNPA
EVLVLANGIAEPLRQRGLGVERLRARDGAPPADIEVALLPDIRTEREWVADALAQRWFAH
QAEHGAPPTAAVLVRRRADMAPIAAELRARGLPVEVVGLGGLLDEPEVADLVATLRVLAD
PLAGTAAARLLTGARWRLAAADLAALWRRANEISAPPPTEESKVDDLFAERAEQTGLIDA
LDDPGDPKRYSPEGYRRIRELGHELAALRRRLDQSLPELVADVERTMLLDVEAQARPGSA
RRAHLDAFADVVTDFAETSPTATLMSFVDYLATAAHAEDGLTPGEVEVVPDRVQVLTVHS
AKGLEWEVVAVPHLAREVFPNKRRSSSWLRTVTSLPAALRGDSEDLPKLRVSDGMDRKEV
IEAFEIHEQDFAEREAEEERRLCYVALTRSERALIVSGHWWNETSARPKGPSDFLVEVGE
LAKEGVGKVAVWADEPPADEENPLVSQARSAQWPSDPLTGRRDAVHEGADLVRTALAEGE
VEETDEDDPDGWIADTDVLLAEFAKRSGTAEQVALPDHLSVSQLVELAADPAGLARRLRR
PLPVPPNTFARRGTAFHGWLERRFAGDRLFDLDELPGAADPDEAGDDELEALQEAFDRSA
WAARTPHEVEVPFSTEVDGVTVRGRMDAVFADPDGGWTVVDWKTGAVPEEGRMASLAVQL
AAYRLAWASLSGTPLEKVRAAFHYVREDHTLRPVDLLDADGLRDLLRSVPQP
NT seq
3219 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaaatcgcctccccggccgaggtcgcccacgcgctcggcctccacccgcccacc
cccgagcaggcggcggtcatcgcggcgcccatcgagcccgcgctcgtcgtcgcgggggcc
ggagccggcaagaccgagaccatggccgcgcgagtcgtctggctcgtcgccaatgggttc
gtcaccccggagcgcgtcctgggcctcacgttcacccgcaaggccgcccgccagctcgcc
gaccgtgtccgcgcccgcctgcgccgcctcgccggctcgggcctcctcgaccgcctcgac
ccgggcggcgcgcgccgggccgcggtcgtcgccggggaaccgaccgtcctcacctaccac
gcctacgccggccgcctcctcgccgagcatggcctccgcctgcccgtccagcccggcgtc
cggctgctgtccgaaaccagctcctggcagctcgcccaccgcgtggtctccacctgggac
gaggacctggacaccgaccgcgtcccggcctcggtcaccgcgcaactactcgccctcacc
ggcgaactcggcgaacacctggtcaccgaagaacaactcgccgagtacacccgctggctc
tgcgacctcatcgaacgagccccgcgcgccaaggggcagcgcgccgccatgccgaagtcg
ctcaccgacatcgtcgccgcgcagaagttccgcctctcgctcatcccgctgatcgaggag
taccagcgccgcaaacgggccgagggcgcgctcgacttcgccgaccagatgtcactggcc
gcgacgctcgccgacaaccacccggcggtcgccgagggcgaacgcgcccgctacggcgcc
gtcctcctcgacgagtaccaggacaccggtcacgcgcagcgaatcctgctgcgcgccctg
ttcggcggcgtcgagaacgaaccactgccggtcaccgcggtcggcgaccccgcgcaggcc
atctacggctggcgcggtgccagcgcggccaacctgccccgcttcaccaccgacttcccg
cgccccggccggcaacccgcccgtgagtacggcctgctcaccagcttccgcaacccggcc
gaagtcctcgtcctcgccaacggcatcgccgaaccgctgcggcagcgcggcctcggcgtg
gaacggctccgcgcccgcgacggcgcgccgcccgccgacatcgaagtcgctctgctgccg
gacatccggaccgaacgcgagtgggtcgccgacgccctggcgcagaggtggttcgcccac
caggccgagcacggcgccccgcccaccgccgccgtcctcgtccgccgccgcgccgacatg
gccccgatcgcggccgagctgcgggcccgtggcctcccggttgaggtcgtcggtctcggc
gggctcctcgacgaacccgaggtggccgacctcgtcgccaccctgcgcgtcctcgccgac
ccgctggctggcaccgccgccgcccgcctgctcaccggcgcccgctggcggctcgcggcc
gccgacctggccgcgttgtggcgccgcgccaatgagatctccgcacccccgcccaccgaa
gagtccaaggtggacgacctgttcgccgaacgcgccgagcagaccggcctgatcgacgcg
ctggacgatccgggcgaccccaagcgctactccccggagggctaccgccggatccgggaa
ctgggacacgaactcgccgcgctgcgccgtcggctggaccagtcgctgcccgagctggtc
gccgacgtggaacggaccatgctgctggacgtcgaagcgcaggcccgccccggcagcgcc
cgccgcgcgcacctggacgcgttcgccgacgtggtcaccgacttcgcggagacctcgccc
accgccaccctgatgtccttcgtggactacctcgccaccgccgcgcacgccgaggacggc
ctcactccgggcgaggtcgaggtggtgccggaccgggtgcaggtgctgaccgtccactcc
gcgaagggcctggagtgggaggtcgtcgccgtgccgcacctggcgcgcgaggtcttcccg
aacaagcgccggtcctcgtcgtggctgcgcacggtcacgtcgctgcccgccgcgctgcgc
ggtgactccgaggacctgccgaagctgcgcgtgtccgacgggatggatcgcaaggaggtc
atcgaggccttcgagatccacgagcaggacttcgccgagcgcgaggcggaggaggaacgc
cgcctctgctacgtcgcgctgacccgctccgagcgcgcgctcatcgtctccgggcactgg
tggaacgaaaccagcgcccgtcccaaggggccgtcggacttcctggtcgaggtcggcgaa
ctggcgaaggagggcgtcggcaaggtcgccgtctgggccgatgagccgcctgccgacgag
gagaacccgctggtcagccaggcccggtcggcgcagtggccgtccgacccgctgaccggc
cgccgcgacgccgtgcacgagggcgccgacctggtgcgcaccgcgctggccgagggcgag
gtcgaggaaacagacgaggacgacccggacggctggatcgccgacaccgacgtgctgctc
gccgagttcgccaagcgcagcggcacggccgagcaggtcgccctgccggaccacctgtcg
gtgagccagctcgtcgagctcgccgcggacccggccgggctggcccgccgcctgcgccgc
ccgttgccggtgccgcccaacacgttcgcccgccgcggcaccgcgttccacggctggctg
gagcgccgcttcgccggcgaccgcctgttcgacctcgacgaactgcccggagccgccgac
cccgacgaggccggcgacgacgaactcgaagcgctgcaggaggccttcgaccgcagcgca
tgggccgcgcgcaccccgcacgaggtggaggtgccgttctccaccgaggtcgacggcgtg
accgtgcgcgggcgcatggacgccgtgttcgccgacccggacggcggctggaccgtcgtg
gactggaagaccggcgcggtgcccgaggagggccggatggcttcgctcgccgtgcagctg
gcggcgtaccgtctggcttgggcgtcgctgtccggaacgccgttggagaaggtgcgcgcc
gccttccactacgtgcgcgaagaccacacgctgcgcccggtggacctgctcgacgccgac
ggtctgcgcgacctcctgcgcagtgtgccgcagccctag
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