Amycolatopsis methanolica: AMETH_1376
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Entry
AMETH_1376 CDS
T03230
Symbol
pcaR
Name
(GenBank) IclR family transcriptional regulator
KO
K02624
IclR family transcriptional regulator, pca regulon regulatory protein
Organism
amq
Amycolatopsis methanolica
Brite
KEGG Orthology (KO) [BR:
amq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
amq03000
]
AMETH_1376 (pcaR)
Transcription factors [BR:
amq03000
]
Prokaryotic type
Helix-turn-helix
IclR family
AMETH_1376 (pcaR)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IclR_C
HTH_IclR
HTH_20
MarR_2
HTH_11
HTH_29
HTH_Crp_2
TrmB
HTH_23
Motif
Other DBs
NCBI-ProteinID:
AIJ21468
UniProt:
A0A076MKU2
LinkDB
All DBs
Position
complement(1411969..1412739)
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AA seq
256 aa
AA seq
DB search
MSREDPDVIDSVEKAFRLLQTFSAERPAMTVSEAAAATGFTRATARRILLTLERLGFAEV
DDRRFRLTAGVLRLGYGYLAALPFWEHAQPHMRALADELRESCSMATLDGPEIVYVARVP
ASRSMSITLNVGSRLPAYPTSMGRVLLAALPSAELESYLDTVELRKLTPNTITDPAELRA
ELARVAERGYAVVDGEREEGVRSAAAPVRGGGGRALAALNVSVNAARVSLDELTDRFVPR
LLDTAAAITRDIEGLH
NT seq
771 nt
NT seq
+upstream
nt +downstream
nt
gtgtcgagagaggaccccgacgtcatcgactcggtggagaaggccttccggctgctgcag
accttttccgcggaacggccggcgatgacggtgagcgaggcggccgcggccaccgggttc
acccgcgccaccgcgcgccgcatcctgctgacactggaacgcctcgggttcgccgaggtg
gacgaccgccgcttccgcctcaccgcgggcgtcctgcggctcggctacggctacctggcc
gcgctgccgttctgggagcacgcccagccgcacatgcgcgcgctggccgacgagctgcgg
gaatcctgctcgatggccactttggacggtccggagatcgtctacgtggcccgggttccg
gcgtcgcgctcgatgtccatcacgctcaacgtcggttcgcgcctgcccgcctaccccacg
tcgatgggccgcgtgctgctcgccgcgctgccatccgccgagctggagtcttatctggac
accgtggaactgcggaagctcacacccaacaccatcaccgaccccgccgagctgcgggcg
gaactggcccgggtcgccgagcgcgggtacgccgtggtggacggcgagcgcgaggaaggc
gtccgctcggccgccgcgcccgtgcgtggcgggggcgggcgggcgctggccgcgctcaac
gtgtcggtcaacgcggcccgcgtctcgctggacgaactcaccgaccggttcgtgccgcgc
ctgctggacaccgccgcggccatcacccgcgacatcgagggtctgcactag
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