Amycolatopsis methanolica: AMETH_1528
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Entry
AMETH_1528 CDS
T03230
Name
(GenBank) histone family protein DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
amq
Amycolatopsis methanolica
Brite
KEGG Orthology (KO) [BR:
amq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
amq03032
]
AMETH_1528
03036 Chromosome and associated proteins [BR:
amq03036
]
AMETH_1528
03400 DNA repair and recombination proteins [BR:
amq03400
]
AMETH_1528
DNA replication proteins [BR:
amq03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
AMETH_1528
Chromosome and associated proteins [BR:
amq03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
AMETH_1528
DNA repair and recombination proteins [BR:
amq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
AMETH_1528
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
DUF1869
Motif
Other DBs
NCBI-ProteinID:
AIJ21620
UniProt:
A0A076MS40
LinkDB
All DBs
Position
1561336..1561971
Genome browser
AA seq
211 aa
AA seq
DB search
MANKAQLIEALSERLGDKKVASQAVDNLVDIIIRTVQKGEKVNITGFGVFEKRARAARTA
RNPRTGETVKVKKTNVPAFRAGTTFKDVISGAKKLPKATAAKRTTTSTRSAAASTRSTGT
TASRSTTSRATTAKATTTRPTATRSTSTRSRAAAATKTAAPKATASKATASKTTAAKSTA
AKKTTATKAAPKATAAKTTAAKKTTTTRKKK
NT seq
636 nt
NT seq
+upstream
nt +downstream
nt
atggccaacaaggcccagctgatcgaggcgctctccgagcgtctgggcgacaagaaggtt
gcttcccaggcggtcgacaacctggtggacatcatcattcgcaccgtgcagaagggcgag
aaggtcaacatcaccggtttcggtgtgttcgagaagcgtgcccgcgcggcccgcaccgct
cgcaacccgcgcaccggtgagacggtcaaggtgaagaagaccaacgttccggccttccgc
gccggcacgaccttcaaggacgtcatcagcggtgccaagaagctgccgaaggccacggcg
gcgaagcgcacgacgacttcgacccgcagcgctgccgcttcgacccgcagcaccggcacc
accgcgtcgcgctcgacgacctcgcgggccaccaccgcgaaggcgaccaccacgcgtccc
accgcgacccgcagcaccagcacgcgcagccgcgccgcggccgccaccaagacggcggcc
ccgaaggccacggcttcgaaggctacggcttcgaagaccacggcggcgaagtccaccgcg
gccaagaagacgaccgccacgaaggcggccccgaaggccaccgcggcgaagaccactgcc
gcgaagaagaccaccacgacccggaagaagaagtaa
DBGET
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