KEGG   Amycolatopsis methanolica: AMETH_1638
Entry
AMETH_1638        CDS       T03230                                 
Symbol
whiG
Name
(GenBank) RNA polymerase sigma factor
  KO
K02405  RNA polymerase sigma factor FliA
Organism
amq  Amycolatopsis methanolica
Pathway
amq02020  Two-component system
amq02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:amq00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    AMETH_1638 (whiG)
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    AMETH_1638 (whiG)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:amq03021]
    AMETH_1638 (whiG)
  09183 Protein families: signaling and cellular processes
   02035 Bacterial motility proteins [BR:amq02035]
    AMETH_1638 (whiG)
Transcription machinery [BR:amq03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     AMETH_1638 (whiG)
Bacterial motility proteins [BR:amq02035]
 Flagellar system
  Flagellar assembly proteins
   Stator
    AMETH_1638 (whiG)
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r4 Sigma70_r4_2 Sigma70_r3 HTH_23 UPF0122 KORA
Other DBs
NCBI-ProteinID: AIJ21730
UniProt: A0A076MSG0
LinkDB
Position
1676990..1677727
AA seq 245 aa
MWREFRERPEQRLRERLVLHYAPLVKYVAGRVGTGLPTHVDVSDLIQSGIFGLIDAIEKF
EPERGLRFETYAMQRIRGAILDDLRSQDWVPRVVRSRAREVERALERLGGRLRRTPTDTE
VAAELGITLDELRDLYSQLQLTSVVALEDLMAAGRESGSLVDTLPDDDAIDPVAVLVDRD
NRRQLAEAIAQLTERDRIVVSLYYFERLTLAEIGRVLGVTESRVSQLHTRAVLRLRARLT
EQAGV
NT seq 738 nt   +upstreamnt  +downstreamnt
gtgtggcgcgagttccgcgaacgtccggagcagcggctgcgcgagcgcctggtcctgcac
tacgcgccgctggtcaagtacgtcgccgggcgggtcggcaccgggctgcccacgcacgtc
gacgtcagcgacctgatccagtccggcatcttcggcctgatcgacgccatcgagaagttc
gaacccgagcgtggcctgcggttcgagacctacgcgatgcagcgcatccgcggcgcgatc
ctcgacgacctgcgctcgcaggactgggtgccccgagtggtgcgcagccgcgcccgtgag
gtggagcgcgccctcgaacgcctcggcggcaggttgcgccgcaccccgaccgacaccgag
gtcgccgccgagctgggcatcaccctcgacgagctgcgcgacctctacagccagctgcag
ctgaccagcgtggtcgcgctcgaggacctcatggcggcaggccgggagagcggctcgctg
gtcgacacgctccccgacgacgacgccatcgaccccgtcgccgtgctcgtcgaccgggac
aaccgccgccagctcgccgaggccatcgcgcagctcacggaacgcgaccggatcgtggtc
agcctctactacttcgaacggctgacgctcgctgagatcgggcgcgtccttggtgtcacc
gagtcgcgggtcagccagctgcacacacgcgccgtcctccggctgcgggctcggctcacg
gagcaggccggggtctag

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