Amycolatopsis methanolica: AMETH_2294
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Entry
AMETH_2294 CDS
T03230
Symbol
rhsA
Name
(GenBank) rhs protein
Organism
amq
Amycolatopsis methanolica
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHS_repeat
DUF6531
TEN_YD-shell
WXG100
PPE
DUF6693
DUF948
T7SS_signal
Endonuclea_NS_2
Motif
Other DBs
NCBI-ProteinID:
AIJ22386
UniProt:
A0A076MU02
LinkDB
All DBs
Position
2384176..2389164
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AA seq
1662 aa
AA seq
DB search
MVNPLVAQEQSSTTAISGISLLEGAQDLKKAIESGDWASGALGAAAAGLDALGFVLDPFG
SILAAGVGWLIEHVGPLKDALDALAGNPDAVKAHSETWKNIAAELGEIGTDLANQVNADL
TGWTGPSADTYRQQAKGVGDLLAAAKEAGEGTASGIETAGTVVAAVRTLVRDIIAEVVGH
MISWALQVIATLGIALAWVVPQVISEVAKTAAKIADITGKLTHALKALAELLKKAGGLFT
DTAGKLKKIKTDKPPTSAGPGGLPAGPKNVDPMAGKGGGTIPNSTAKTPPPDAAKVAPPP
KLNDTPGDTTKASSTPDAPPVSAPPKLDGPPPGGTPKSAPEPAPVPVSAPPKLDGGTTPS
SAGGTSKSAPPKVQDPPNLGDSTTPSSAGGTTKGNPATTKEPGKKDCEFDPIDVATGDVL
LTEVDLVVPGALGELITRNHVSSYRGGRWFGPSWTSLLDERLTVAAGTVRYHSADAMVLS
FPVPAPGRSAGVQQGPVRLLHTDGGDYVVTDPGRGLTRRFAFAPGARDELLLREVRTEDG
EFVVLDRDADGTPVLLTHSAGARIAFDTADGRVRSARALSPAGEVPVARYDYDEHGHLAR
RWNSTPRPALYEHDAAGRITGWTDHNGSWYRYVYDDAGRCVRTVGDRGFLDGALEFAPGR
TTTTDSLGHRKTFEFDAEGNLVAETDKLGAVTRSEWGPNRLLRARTDPLGRRTEFEHDAA
GILRAVVRPDGSRVVIVEHTATALEIAVTEGDRTFRRRYTDPVPDPYTTPLGVSEEDEDE
AGRPPAQAGPVIEEDLFGRPRVLREPGGPVTLAWTVEGDLRAVTTADGARRQWTYDGEGG
ETSHTDALDRVTVTERGPFAIVTGTVDATGARTLRHYDTELRLTAVTNPAGQTWTFTYDA
EGRLTGQTDFDGRTTQCSYDAAGQLVRLVNAAGEVVDYRYDALGNLTERTAGGVTETYRH
DPVGRLVHLAGPGAEITLERDDEGRVVRQTTAGRTTTFGYPDAFSTNRRTPSEVDVHWGR
SESGVDTVTVGGTTLTLHRDENGRTVAANAGATPVVRRDFDARGRLLAQQTPAGTWRYRR
RPDGSIETREDPSGGARYEFDRLGRVTAVHTPGHTERYAYDVLGNVVLSQPGGGAEAGPR
QYRGGLVEAAGAVRYDHDAQGRLVRRMAPGPAGELTWSFTWDAHDHLTGVRTPDGAVWHY
LYDPMDRRVAKQRLQPDGTVAERVEFVWDGNTLVEALHTVRGALVSVLTWVHHPDDGRPV
AQAVTGPDGITRLSVLVTDDVGTPVEAVDLGDGTVRPLRTTLWGLTRSGDGDATPLRFPG
QYHDAETGLHFNVFRYYDPATGRFVSPDPLGLNPAPNPLAYVADPLMQSDPLGLTGGGFD
AGDFRRFSGRSTAGKCSTQKTPAPSFTPYPKTKPKKGSTSGSTSSAGPSTPAPPRGTRDP
VSGRFTSQGGGTTSGLQVLDGSPRPGGSKPQPGELTDVIDLNKTKHSNYSKELQDELSKV
NGYNPNGDNRWIRGHLQNDNLGGPGISSNMTPLTSTANKNMSGTFEGPLKNANIRLDQLK
SQIPTDAQLGRAGFDPSQFDKVRKDIQNLTVEYRVDVSPDVKFPDSSNPFERSIRQYLVL
NAEYKGLTPEVQQYIGFAKEKNFLPKLPPPGTKMDTLTGAFS
NT seq
4989 nt
NT seq
+upstream
nt +downstream
nt
gtggtgaaccccctggtcgcgcaagagcagagctcgacgaccgcgatctcggggatctcc
ctcctggagggcgcgcaggacctcaagaaggccatcgaaagcggcgactgggcctccggc
gcgctgggggccgccgcggccgggctcgacgcgctcgggttcgtgctcgacccgttcggc
tcgatcctcgccgccggcgtgggctggctcatcgagcacgtcggcccgctcaaggacgcc
ctcgacgcgctggcgggcaacccggacgcggtcaaggcccactcggagacgtggaagaac
atcgccgccgagctgggcgagatcggcacagacctggccaaccaggtcaacgccgacctg
accggctggaccggcccgtccgcggacacctaccggcagcaggccaagggcgtcggcgac
ctgctcgccgcggcgaaggaagccggtgaaggcaccgccagcggcatcgagaccgcgggc
accgtcgtcgccgccgtgcggaccctggtgcgcgacatcatcgccgaggtcgtcgggcac
atgatctcgtgggcgctgcaggtgatcgccacccttggcatcgcgctggcgtgggtcgtg
ccgcaggtgatcagcgaggtcgccaagaccgccgccaagatcgccgacatcaccgggaag
ctgacccacgcgctcaaggcgctcgcggaactgctgaagaaggccggcggcctcttcacc
gacaccgcgggcaagctgaagaagatcaagaccgacaagccgccgacctcggccgggccg
ggcggtctccccgcgggcccgaagaacgtcgaccccatggcgggcaagggcggcggcacc
atcccgaacagcacggcgaagacgccgccgccggacgcggccaaggtcgccccgccgccc
aagctcaacgacacccctggcgacacgaccaaggcatcgtccacaccggacgccccgccg
gtctcggccccgcccaagctggacggcccgccgccgggcggcacgcccaagtccgcgccc
gagccggccccggtccccgtgtcggcgccgccgaagctcgacggcgggaccacgccgtcc
tcggccggtggcacctcgaagagcgcgccgccgaaggttcaggacccaccgaacctcggc
gactccaccaccccgtcgtcagcaggcggcaccacgaagggcaacccggccacgacgaag
gagccgggcaagaaggactgcgagttcgaccccatcgacgtcgcgaccggcgacgtcctg
ctcaccgaggtggacctggtggtccccggagcgctgggcgaactcatcacgcgcaaccac
gtttcgtcctaccggggcgggcgctggttcggtccgtcgtggacgtccctcctggacgaa
cgactgaccgtcgcggcgggcacggtgcgctaccactccgccgacgccatggtgctgagc
ttcccggtcccggcgcccggccggtccgccggtgtccagcagggcccggtgcggctgctg
cacaccgacggcggcgactacgtggtcaccgatcccggccgcggcctcacccggcggttc
gcgttcgccccgggcgcccgggacgagctgctgctgcgtgaggtgcgcaccgaggacggc
gagttcgtcgtcctggaccgcgacgccgacggcacgccggtcctgctgacccactccgcg
ggcgcgcggatcgccttcgacaccgcggacggccgcgtccgctccgcccgcgcgctctcc
ccggcgggggaggtcccggtcgcccgctacgactacgacgagcacggccacctcgcccgc
cggtggaactccaccccccggccggcgctttacgagcacgacgccgcgggccggatcacc
ggctggaccgaccacaacggctcgtggtaccgctacgtctacgacgacgccgggcgctgc
gtgcgcacggtcggcgaccgcggtttcctcgacggcgcgctggagttcgccccgggccgc
accacgaccacagactcgctggggcaccgcaagaccttcgagttcgacgccgagggcaac
ctcgtcgccgagaccgacaagctgggcgcggtcacccgcagcgagtggggcccgaaccgc
ctcctgcgtgcccggaccgacccgctcggcaggcggaccgagttcgagcacgacgcggcg
gggatcctgcgcgcggtggtgcggccggacggcagccgcgtcgtcatcgtcgagcacacg
gccaccgcgctggagatcgcggtcaccgagggcgaccgcacgttccggcgccgctacacc
gacccggtgcccgacccgtacaccaccccgctgggcgtgtccgaagaggacgaggacgag
gcggggcggcccccggcacaggccgggcccgtgatcgaggaggacctgttcggccgcccg
cgcgtgctgcgcgaacccggcggcccggtcaccctggcctggacggtggagggcgacctg
cgggcggtcacgaccgccgacggcgcgcggcggcagtggacctacgacggtgaaggcggc
gagacgtcgcacaccgacgccctggaccgcgtgaccgtcaccgagcgcggtccgttcgcc
atcgtcacgggcacggtggatgccaccggcgcacgcacgctccgtcactacgacaccgag
ctgcgtctgacggccgtgaccaacccggcgggccagacctggacgttcacctacgacgcc
gaggggagactgaccggtcagaccgacttcgacgggcgcaccacgcagtgctcctacgac
gcggcggggcagctggtccggctggtcaacgccgcgggcgaagtcgtggactaccgctac
gacgcgctcggcaacctgaccgagcgcaccgcgggcggtgtgaccgagacctaccgccac
gacccggtgggcaggctggtgcacctcgcgggcccgggcgcggagatcaccctggagcgc
gacgacgagggccgggtggtgcgccagaccaccgccggccgcaccaccacgttcggctac
ccggacgcgttctccaccaaccggcgcacaccgtccgaagtggacgtccactggggacgc
tccgagagcggggtggacaccgtcaccgtcggcggtacgacgctgaccctgcaccgcgac
gagaacggccgcacggtcgcggccaacgcgggcgccacacccgtggtgcgcagggacttc
gacgcgcgcggcaggctgctcgcgcagcagaccccggccggcacgtggcgctaccgccgg
cggccagacggcagcatcgagacgcgggaggacccgtcaggcggcgcccgctacgagttc
gaccggctcggccgcgtcaccgccgtgcacacgcccggccacaccgaacgctacgcctac
gacgtgctcggtaacgtcgtgctgtcccagcccggcggcggggcggaggccggcccgcgg
cagtaccgcggtggtctcgtcgaagccgccggcgcggtgcggtacgaccacgacgcgcag
ggacggctggtccggcgcatggcgcccggcccggccggtgagctcacctggtcgttcacc
tgggacgcccacgaccacctgaccggcgtccgcaccccggacggcgcggtgtggcactac
ctctacgacccgatggaccgccgggtcgccaagcagcgcctgcagccggacggcacggta
gccgagcgggtcgagttcgtctgggacggcaacaccctcgtcgaggccctgcacaccgtg
cgcggtgcgctcgtgtcggtgctgacctgggtgcaccacccggacgacggcaggccggtg
gcgcaggcggtcaccggcccggacgggatcacccggttgtccgtcctggtcaccgacgac
gtcggcacgccggtcgaggcggtcgacctcggcgacggcacggtccggccgctgcgcacg
acgctgtggggcctgacccgcagcggtgacggcgacgcgacgccgctgcggttcccaggg
cagtaccacgacgcggagaccgggctgcacttcaacgtgttccgctactacgacccggcc
accggccggttcgtctcgcccgacccgctgggcctcaacccggcgccgaacccgctggcg
tacgtggccgacccgctgatgcagtccgacccgctcggcctcaccggcggcgggttcgac
gccggtgacttccggcggttctccggccgctccaccgcgggcaaatgcagtacgcagaag
acgcccgcgccgtcgttcacgccgtacccgaagacgaagccgaagaagggcagcacctcc
ggcagcacgtcctcggccggaccgtcgacgccggctccgccgaggggcacgagggacccg
gtcagcggccggttcacctcgcagggcggcggcaccacgtccggtctgcaggtgctcgac
ggcagcccgcgtcccggcggctccaagccgcagccgggcgagctcaccgacgtcatcgac
ctcaacaagaccaagcactcgaactacagcaaggagctgcaggacgagctgtcgaaggtc
aacgggtacaaccccaacggcgacaaccgctggatccgcggtcacctgcagaacgacaac
ctcggtggcccgggcatctcgagcaacatgacgccgctgacgtccacggcgaacaagaac
atgtcgggcacgttcgagggtccgctgaagaacgccaacatccggctcgaccagctcaag
agccagatcccgacggacgcgcagctgggacgggccgggttcgacccgagccagttcgac
aaggtccgcaaggacatccagaacctgactgtcgagtaccgggtcgacgtcagcccggac
gtgaagtttcccgactcgtccaacccgttcgagcgctcgatccgccaatatctggtgctc
aacgccgagtacaagggcctcacacccgaggtgcagcagtacatcgggttcgcgaaggag
aagaacttcctgccgaagctgccgccgccgggcacgaagatggacaccttgacgggcgcg
ttctcgtag
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