Amycolatopsis methanolica: AMETH_2459
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Entry
AMETH_2459 CDS
T03230
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
amq
Amycolatopsis methanolica
Brite
KEGG Orthology (KO) [BR:
amq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
amq03016
]
AMETH_2459
Enzymes [BR:
amq01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
AMETH_2459
Transfer RNA biogenesis [BR:
amq03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
AMETH_2459
Prokaryotic type
AMETH_2459
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
AIJ22551
UniProt:
A0A076MUI5
LinkDB
All DBs
Position
2549799..2550641
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AA seq
280 aa
AA seq
DB search
MTSHDVVARVRRIMGTRKVGHAGTLDPMATGVLVLGVERATKLLGHLALDRKTYLATLAL
GVSTTTDDAEGEHTATADPDTLAAVTDEAIASGIAALTGEIQQVPSAVSAVKIAGKRAYA
RVRAGEEVALKPRPVTVYRFDLLATRRAAGRIELDAVVECSSGTYVRALARDLGAALGVG
GHLAALRRTTVGPFGIAAARTLEQLEEKPELSFDLNEAVSAAFPRYDVDAATARAVRYGQ
QVRASGLEGTYGVFDPDGQVLALAVDAGGVARSVVVLAPA
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
atgacctcacacgacgtggtggcgcgggtgcgccggatcatgggcactcgcaaggtcggg
cacgccggcacgctcgacccgatggccaccggcgtgctggtgctgggcgtcgagcgggcg
accaagctgctgggccacctcgcgctggaccgcaagacctacctcgccacgctggccctc
ggcgtctcgaccaccaccgacgacgccgagggcgagcacaccgccaccgcggacccggac
acgctggccgccgtcaccgacgaggcgatcgcgtccgggatcgccgcgctcaccggggag
atccagcaggtcccgagcgcggtgagcgcggtgaagatcgccggcaagcgggcgtacgcg
cgggtgcgggccggtgaagaggtcgcgctcaagccgcggccggtcaccgtgtaccggttc
gacctgctcgccacccgccgcgccgccggccgcatcgagctggacgccgtcgtcgagtgc
tcgtcgggcacctacgtgcgggcgctggcccgcgacctcggcgcggcgctcggcgtcggc
ggtcacctcgccgcgttgcgccgcaccacggtcggcccgttcggcatcgccgcggcgcgc
acgctggagcagctggaggagaagccggagctgtcgttcgacctcaacgaggccgtcagc
gccgccttcccccggtatgacgtcgatgcggccaccgccagggctgtccggtatggacag
caggtccgcgcgtccggcctggagggcacttacggcgtgttcgacccggacggccaagtg
ctcgctctcgccgtcgatgccggcggcgtggcccgctcggtggtcgtcttggctccggcc
tag
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