Amycolatopsis methanolica: AMETH_2525
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Entry
AMETH_2525 CDS
T03230
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoylalanine-D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
amq
Amycolatopsis methanolica
Pathway
amq00470
D-Amino acid metabolism
amq00550
Peptidoglycan biosynthesis
amq01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
amq00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
AMETH_2525 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
AMETH_2525 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
amq01011
]
AMETH_2525 (murD)
Enzymes [BR:
amq01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
AMETH_2525 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
amq01011
]
Precursor biosynthesis
Amino acid ligase
AMETH_2525 (murD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
MurD-like_N
AlaDh_PNT_C
TrkA_N
NAD_binding_7
AdoHcyase_NAD
ADH_zinc_N
DAO
Shikimate_DH
GP38
NAD_binding_2
Pyr_redox
3HCDH_N
Motif
Other DBs
NCBI-ProteinID:
AIJ22617
UniProt:
A0A076MYF1
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All DBs
Position
2621174..2622568
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AA seq
464 aa
AA seq
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MFAGRNVLVAGAGVTGRSAVRALTERGARVTVTDGNAERLAELDGLGAELAPGLTEPPAG
TDLVVTSPGWRPTAPLLVASAAAGIEVIGDVELAWRASRDLPNPATWLAVTGTNGKTTTV
GMLESMLRAGGVHALACGNIGLPVLDAVFEGYEALAVELSSFQLHWSSTLAPHASVVLNL
AEDHLDWHGTMESYAAAKGTIHAHSNVVVHNSDDPWSVRLAGEYAPAGAKRVGFRLDTPR
PGELGLVEDLLIDRAYGPDPQHSADELISVSEVRPAGPHNLANALAAAALARAYGIDPAG
VAKGLREFQPGAHRAVEVGEFGGVRYVNDSKATNPHAAAGSLLAHSSVVWIAGGQLKGAA
VDELVEVVAGRLRGVVLMGADAPVIAAALARHAPDVPVHRVASGDDGAMNEAVSVASDLA
RPGDVVLLAPAGASLDMFRNYAHRGDAFADAVLARASGSADDGR
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
gtgttcgccggacgcaacgtgctcgtcgccggcgccggggtcaccgggcgctcggccgtg
cgggccctgaccgagcgtggcgcccgggtcacggtcaccgacggcaacgccgagcggctg
gccgagctggacggcctgggcgccgaactggccccgggcctcaccgaaccgcccgccggc
accgacctggtggtcaccagccccggctggcggccgaccgcgccgctgctggtcgcctcg
gccgccgcaggcatcgaggtgatcggcgacgtcgagctggcctggcgcgcctcccgggac
ctgccgaacccggccacctggctcgccgtcaccggcaccaacggcaagaccacgacggtg
ggcatgctggagtcgatgctgcgtgccggcggagtgcacgcgctggcctgcggcaacatc
ggcctgccggtgctggacgcggtgttcgagggttacgaggcgctggcggtggagctgtcc
agcttccagctgcactggtcctcgacgctcgcgccgcacgcgtcggtggtgctcaacctc
gccgaggaccacctggactggcacggcacgatggagtcctacgccgccgcgaagggcacc
atccacgcccactcgaacgtcgtcgtgcacaactcggacgatccgtggtcggtgcggctg
gccggcgagtacgcccccgccggggcgaagcgcgtcgggttccggctggacaccccgcgg
ccgggcgagctgggcctcgtcgaggacctgctgatcgaccgcgcctacggcccggacccg
cagcactccgccgacgagctgatctcggtgagcgaggtgcgcccggcgggcccgcacaac
ctcgccaacgccctcgccgcggccgcgctggcccgcgcctacggcatcgaccccgcgggg
gtcgccaagggcctgcgcgagttccagccgggcgcgcaccgagccgtcgaggtgggcgag
ttcggcggggtccgctacgtcaacgactccaaggccaccaacccgcacgccgcggccggg
tcgctgctcgcgcactccagcgtggtgtggatcgcgggcgggcagctcaagggcgccgcg
gtcgacgagctggtcgaggtggtcgccgggcggctgcgtggcgtggtgctgatgggcgcc
gacgccccggtgatcgccgccgctctcgcgcgacacgcgccggatgtccccgtccatcgg
gtcgcctcgggtgacgatggggccatgaacgaggcggtctcggtggccagcgacctggcc
cggcccggtgacgtggtgctgctggcgcccgccggagcgtccctggacatgttccgcaac
tacgcccatcggggtgacgccttcgccgacgcggtcctggcccgtgcctcggggtctgcc
gatgacggtcgttga
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