Amycolatopsis methanolica: AMETH_2566
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Entry
AMETH_2566 CDS
T03230
Symbol
sigB
Name
(GenBank) RNA polymerase sigma factor, sigma-70 family
KO
K03090
RNA polymerase sigma-B factor
Organism
amq
Amycolatopsis methanolica
Brite
KEGG Orthology (KO) [BR:
amq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
amq03021
]
AMETH_2566 (sigB)
Transcription machinery [BR:
amq03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
AMETH_2566 (sigB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
MarR_2
HTH_Crp_2
HTH_24
DUF7343
MarR
HTH_3
HTH_23
Sigma70_ECF
GerE
HTH_31
HTH_IclR
TetR_C_11
KORA
HTH_7
Phage_antitermQ
Trp_repressor
LacI
HTH_26
Motif
Other DBs
NCBI-ProteinID:
AIJ22658
UniProt:
A0A076MP17
LinkDB
All DBs
Position
complement(2667072..2667866)
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AA seq
264 aa
AA seq
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MAETRLAGTVEDNDSSEENTPTFADLAAAAPDDPCRARLRTALVTQYLSVAEHIARRFSG
RGEAYEDLLQVARVGLINAVDRFEPERGTDFLSFAVPTIMGEVRRHFRDASWSVRVPRRL
KELHLQIGQASNELGQRLGRAPTPTEIARELDLTPDEVSEGLQAGNAYYAVSVDKPAGED
DEAASLADTLGEEDYGIETVENHEALQPLLRDLAPRERTILMLRFFGNMTQTQIAKRVGI
SQMHVSRLLAQTLQHLREKLTEEP
NT seq
795 nt
NT seq
+upstream
nt +downstream
nt
ttggctgagacgcgcctcgcgggcaccgtcgaggacaacgattcctcggaggagaacacc
cccactttcgccgatctggcggccgccgcgccggacgatccgtgccgggcacggctccgc
accgcgctggtcacccagtacctgtcggtggccgagcacatcgcgcgccggttcagcggg
cgcggcgaggcgtacgaggacctgttgcaggtcgcgcgggtcgggctgatcaacgccgtc
gaccggttcgagccggaacgcggcaccgacttcctgtccttcgccgtgccgaccatcatg
ggcgaggtccggcggcacttccgcgacgccagctggtcggtgcgggtgccgcggcggctc
aaggaactccacctgcagatcgggcaggccagcaacgaactgggccagcgcctcggccgc
gcgccgacgccgacggagatcgcgcgcgagctggacctcacgccggacgaggtgagcgag
ggcctgcaggcgggcaacgcctactacgcggtgtcggtcgacaaaccggccggtgaggac
gacgaggccgcgtcgctggccgacaccctcggcgaagaggactacggaatcgagacggtg
gagaaccacgaggcgctgcaaccgctgcttcgcgacctggccccgcgcgagcggaccatc
ctgatgctgcggttcttcggcaacatgacgcagacgcagatcgccaaacgcgtcggcatc
tcccagatgcacgtgtcgcgactgctcgcgcagaccctgcagcacctccgggaaaagctc
accgaagagccctga
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