KEGG   Amycolatopsis methanolica: AMETH_2958
Entry
AMETH_2958        CDS       T03230                                 
Symbol
polA
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
amq  Amycolatopsis methanolica
Pathway
amq03030  DNA replication
amq03410  Base excision repair
amq03420  Nucleotide excision repair
amq03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:amq00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    AMETH_2958 (polA)
   03410 Base excision repair
    AMETH_2958 (polA)
   03420 Nucleotide excision repair
    AMETH_2958 (polA)
   03440 Homologous recombination
    AMETH_2958 (polA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:amq03032]
    AMETH_2958 (polA)
   03400 DNA repair and recombination proteins [BR:amq03400]
    AMETH_2958 (polA)
Enzymes [BR:amq01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     AMETH_2958 (polA)
DNA replication proteins [BR:amq03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     AMETH_2958 (polA)
DNA repair and recombination proteins [BR:amq03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     AMETH_2958 (polA)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     AMETH_2958 (polA)
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N 5_3_exonuc DNA_polI_exo1 DNA_pol_A_exo1 HHH_2 DNA_pol_lambd_f HHH_5 NYN_YacP
Other DBs
NCBI-ProteinID: AIJ23050
UniProt: A0A076MWB2
LinkDB
Position
3079105..3081768
AA seq 887 aa
MLIDGHSMAYRAFFAVPADRFKTSTGQVTNAVFGFTSMLINLLRDEQPTHLAVAFDVSRQ
TFRSATFADYKATRTSTPDEFKGQVDLVKDVLGVLGIPALTKENYEADDIIATLTTQATA
EGYQVLICTGDRDALQLVDDSTTVLYPRKGVSDLVRYDPAGVAEKYGLTPSQYPDFAALR
GDPSDNLPGIPGVGEKTATKWIQQFGSLDALIDRVDEVKGKVGDALRAHLSSVTLNRQLT
ELVRDVPLDATPGDLALRPWDRDAVHRLFDELEFRVLRDRLFQTLSSAEPEAESGFEVEG
AAVPSGGLAAWLSKHTKAGQTVGLSFRTTGSSVRSDIQSISLAAPGGEAGYVDVTALDEA
DEQALAAWLADPAIAKAGHALKVPLHALRARGWKLAGLAMDTELAAYLVRPGQRSFELDD
LVLRYLQRELRNDSDSGDGQLSLLDGDDGDKKLVQGELVRASAVAELAGALSSELEKISG
TRLLGDIELPLLQVIAEVEAAGVAVDIEQLTALEAHYGARVKQAAEAAYGVIGKQVNLGS
PKQLQVVLFDELGMPKTKRTKTGYTTDAEALQTLYEKTEHPFLQHLLEHRDATRLKSTVE
GLLKSVADDGRIHTTLHQTIAATGRLSSVDPNLQNIPIRTEEGRRIRDAFVVGDGYAELL
TADYSQIEMRIMAHLSEDAALIEAFQSGFDFHAATAARVFGVDPAEVTGPQRAKIKAMNY
GLAYGLSAYGLSQQLRISTEEARGLMDEYFARFGGVRDYLHSVVVEAGKVGYTETIFGRR
RYLPDLNSDNRQRREMAERMALNAPIQGSAADIIKVAMIGVHRAIAEAGLRSRVLLQVHD
ELIVEVSEGERDQVEELVRREMGAAYELAVPLEVSVGFGRSWNEAAH
NT seq 2664 nt   +upstreamnt  +downstreamnt
ttgctgatcgacggccactcgatggcctaccgcgccttcttcgccgtgcctgccgaccgg
ttcaagacctccaccggccaggtcaccaacgcggtgttcgggttcacctcgatgctcatc
aacctgctgcgcgacgagcagcccacgcacctcgcggtggcgttcgacgtgtcgcggcag
acgttccgctcggcgacgttcgccgactacaaggcgacccggacgtcgacgccggacgag
ttcaaggggcaggtcgacctggtcaaggacgtgctcggggtgctcggcatcccggcgctg
accaaggagaactacgaggccgacgacatcatcgccacgctcaccacgcaggcgacggcc
gagggctaccaggtcctgatctgcaccggcgaccgtgacgcgctgcagctggtggacgac
tcgacgacggtgctgtacccgcgcaagggcgtgtccgacctggtccgctacgacccggcc
ggggtcgccgagaagtacgggctcacgccgtcgcagtacccggacttcgcggcgctgcgc
ggcgacccgtcggacaacctgccgggcatcccgggcgtgggggagaagaccgccaccaag
tggatccagcagttcgggtcgctggacgcgctgatcgaccgggtcgacgaggtcaagggc
aaggtcggggacgcgctgcgcgcacacctgagctcggtgacgctcaaccgccagctcacc
gagctggtgcgggacgtgccgctggacgccacgcccggcgacctcgcgctcaggccgtgg
gaccgggacgcggtccaccggctgttcgacgagctcgagttccgggtgctgcgcgaccgg
ctgttccagacgctgtccagcgccgagccggaggccgagtccgggttcgaggtggagggc
gccgcggtgccctccggcggtctcgcggcgtggctgtcgaagcacaccaaggcaggccag
accgtgggcctgtccttccgcaccaccggttcgtcggtgcggtccgacatccagtcgatc
agcctggccgcgccgggcggggaggccgggtacgtcgacgtcaccgccctggacgaggcc
gacgagcaggcgctggccgcgtggctggccgacccggcgatcgccaaggccgggcacgcg
ctgaaggtgccgctgcacgcgttgcgagcgcgcggctggaagctcgcgggcctggcgatg
gacaccgagctggccgcgtacctggtccggccggggcaacggtcgttcgagctggacgac
ctggtgctgcggtacctgcagcgcgagctgcgcaacgacagcgactccggcgacggccag
ctgtccctgctcgacggcgacgacggcgacaagaagctggtgcagggcgagctggtccgc
gccagcgccgtcgctgagctggccggcgcgctctccagcgagctggagaagatcagcggc
accaggctgctcggcgacatcgagctgccgttgctgcaggtcatcgccgaggtcgaggcc
gcgggcgtggccgtcgacatcgagcagctgaccgcgctggaggcgcactacggtgcccgc
gtgaagcaggccgccgaggccgcctacggcgtgatcggcaagcaggtcaacctgggctcg
cccaagcagctgcaggtggtgctgttcgacgagctgggcatgccgaagaccaagcgcacc
aagaccggctacaccaccgacgccgaggcgctgcagacgctgtacgagaagaccgagcac
ccgttcctgcagcacctgctggagcaccgtgacgccacccggctcaagagcaccgtcgag
ggcctgctcaagtcggtcgccgacgacggccggatccacaccacgctgcaccagaccatc
gcggccaccggacggctgtcctctgtggacccgaacctgcagaacatcccgatccgcacc
gaggagggccgccgcatccgcgacgccttcgtcgtcggcgacgggtacgcggagctgctc
accgcggactacagccagatcgagatgcggatcatggcgcacctgtccgaggacgcggcc
ctgatcgaggcgttccagtccgggttcgacttccacgccgccaccgcggcgcgcgtgttc
ggcgtcgacccggccgaggtcaccgggccgcagcgggcgaaaatcaaggcgatgaactac
ggcctggcctacgggctgtcggcctacgggctgtcgcagcagctgcggatctccaccgag
gaggcccgcgggctgatggacgagtacttcgcccggttcggcggggtgcgcgactacctg
cacagcgtcgtggtcgaggcgggcaaggtcggctacaccgagacgatcttcggccgccgc
cgctacctgcccgacctcaacagcgacaaccggcagcggcgcgagatggccgagcggatg
gcgctcaacgcgccgatccagggcagcgccgccgacatcatcaaggtcgcgatgatcggc
gtgcaccgcgcgatcgccgaggccggcctgcggtcgcgggtgctgctgcaggtgcacgac
gaactgatcgtcgaggtcagcgagggcgagcgcgaccaggtcgaggagctggtgcggcgc
gagatgggcgcggcttacgagctggccgtcccgctggaggtgtcggtcgggttcggccga
tcctggaacgaggcggcgcactga

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