Amycolatopsis methanolica: AMETH_2970
Help
Entry
AMETH_2970 CDS
T03230
Symbol
rpsA
Name
(GenBank) 30S ribosomal protein S1
KO
K02945
small subunit ribosomal protein S1
Organism
amq
Amycolatopsis methanolica
Pathway
amq03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
amq00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
AMETH_2970 (rpsA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
amq03011
]
AMETH_2970 (rpsA)
Ribosome [BR:
amq03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
AMETH_2970 (rpsA)
Bacteria
AMETH_2970 (rpsA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
S1_RRP5
Spt6_S1
S1_2
RNase_II_C_S1
Caudal_act
DUF3987
DUF4407
Motif
Other DBs
NCBI-ProteinID:
AIJ23062
UniProt:
A0A076MZP4
LinkDB
All DBs
Position
3091160..3092656
Genome browser
AA seq
498 aa
AA seq
DB search
MTTDTTTAPTSGAAQVAVNDIGSEEDFLAAIDKTIKYFNDGDIVEGTIVKVDRDEVLLDI
GYKTEGVIPSRELSIKHDVDPGEVVSVGDEVEALVLQKEDKEGRLILSKKRAQYERAWGT
IEELKEKDEPVKGTVIEVVKGGLILDIGLRGFLPASLVEMRRVRDLQPYVGRELEAKIIE
LDKNRNNVVLSRRAYLEQTQSEVRSEFLNALAKGQVRKGVVSSIVNFGAFVDLGGVDGLV
HVSELSWKHIDHPSEVVEVGQEVTVEVLDVDMDRERVSLSLKATQEDPWRQFARTHAIGQ
IVPGKVTKLVPFGAFVRVEEGIEGLVHISELAERHVEIPEQVVQVGTEVMVKVIDIDLER
RRISLSLKQANEGFTTDTEFDPTQYGMAAEYDDQGNYIYPEGFDPDTQEWQEGYDKQREE
WERQYAEAHARYEAHMRQIAKAAEASAQAAAEEATGGPVGGGEQNYSSTGGGSEQRSGGT
LASDEQLAALREKLSGGA
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atgaccaccgacaccaccaccgccccgacgtccggcgccgcccaggtcgccgtcaacgac
atcgggtcggaggaagacttcctcgccgcgatcgacaagacgatcaagtacttcaacgac
ggcgatatcgttgagggcaccatcgtcaaggtcgaccgcgacgaggtgctgctcgacatc
ggttacaagaccgagggcgtcatcccctcgcgtgagctgtccatcaagcacgatgtcgat
cccggcgaggtcgtcagcgtcggtgacgaggtcgaggccctcgttctccagaaggaggac
aaggaaggccggctgatcctgtccaagaagcgcgcccagtacgagcgcgcctggggcacg
atcgaggagctcaaggagaaggacgagcccgtcaagggcaccgtcatcgaggtcgtcaag
ggcggcctgatcctcgacatcggcctgcggggcttcctgcccgcctccctggtggagatg
cgccgcgtgcgcgacctgcagccctacgtcggccgcgagctcgaggcgaagatcatcgag
ctggacaagaaccgcaacaacgtggtcctgtcccgccgggcctacctcgagcagacccag
tccgaggtccgcagcgagttcctcaacgcgctcgccaagggccaggtccgcaagggcgtc
gtgtcctcgatcgtcaacttcggcgcgttcgtcgacctcggcggcgtcgacggtctggtg
cacgtctcggagctgtcctggaagcacatcgaccacccgtccgaggtcgtcgaggtcggc
caggaggtcaccgtcgaggtgctggacgtcgacatggaccgcgagcgcgtgtccctgtcg
ctgaaggcgacccaggaagacccgtggcgccagttcgcccgcacccacgcgatcggccag
atcgtgccgggcaaggtcaccaagctcgtcccgttcggcgcgttcgtccgcgtcgaggag
ggcatcgagggcctggtgcacatctccgagctggccgagcgccacgtggagatcccggag
caggtcgtgcaggtcggcaccgaggtcatggtcaaggtcatcgacatcgacctggagcgc
cgccggatctcgctgtcgctgaagcaggcgaacgagggcttcaccaccgacaccgagttc
gacccgacgcagtacggcatggccgccgagtacgacgaccagggcaactacatctacccc
gagggcttcgaccccgacacgcaggagtggcaggaaggctacgacaagcagcgtgaggag
tgggagcgccagtacgccgaggcgcacgcccgctacgaggcccacatgcggcagatcgcc
aaggctgccgaggccagcgcccaggcggcggccgaggaggccaccggtggtccggtcggc
ggcggcgagcagaactacagctcgaccggcggtggctcggagcagcggagcggcggcacc
ctcgccagcgacgagcagctcgcggctctgcgcgaaaagctctcgggcggtgcgtga
DBGET
integrated database retrieval system
