Amycolatopsis methanolica: AMETH_3904
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Entry
AMETH_3904 CDS
T03230
Name
(GenBank) extracellular solute-binding protein family 5 protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
amq
Amycolatopsis methanolica
Pathway
amq02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
amq00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
AMETH_3904
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
amq02000
]
AMETH_3904
Transporters [BR:
amq02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
AMETH_3904
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
AIJ23996
UniProt:
A0A076MYC0
LinkDB
All DBs
Position
complement(4027322..4028881)
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AA seq
519 aa
AA seq
DB search
MKTASITAAATVLALALTACGGGAGSTTVDGGAFTLVSAGDPGSLDPHFTALSVTIQADR
FLYDTLVNIDPGGNMVAGLAEKWEGDTTTAKYTLRKGITCSDGTPLTASQVADNINFVSD
PANGSASLGLYVMPGATATGDDAAGTVTVTSPTPDSFLVRDIGGLFIVCGKGMADRGLLK
QGADGTGMFTLTEAVAGDHYTLTRRKDYAWGPGDWKTDTRGLPDTVVIRVVGNEITAANL
LASRQVNAATVLGPDQQRLRGMGLTAHDIESPFGELWFNQRAGKPGADVAVRRALTQALD
LGQLGQVLTSGTGRAPKSLLAPGLGPCGGDTISGLLPASDLVAVKSALDSAGWVAGPDGV
RAKDGKPLALTFYYPSTLGSTMQAAAELVQQRWSAVGAQVTVKGMTDTESMQVLTQGGWD
AAFVPLGVFLPSQLVPFFSGSGGNNFAAVQNPAYDAAVQQAGALAGADGCGKWAEAEQAL
VRELNVVPFVNSVRPTFVQGATLETSQGSITPSSIRMLG
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atgaagaccgcttcgatcacggccgcggccaccgtgctggcgctggcgctgaccgcctgc
ggcggcggcgccgggtcgaccactgtggacggtggcgcgttcaccctggtctcggcaggc
gaccccggcagcctcgacccgcacttcaccgcgctgtcggtgaccatccaggccgaccgg
ttcctctacgacacgctcgtgaacatcgacccgggcggcaacatggtcgccgggctcgcg
gagaagtgggaaggcgacaccaccaccgcgaagtacacgctgcgcaagggcatcacgtgc
tcggacgggaccccgctgaccgcgtcgcaggtcgccgacaacatcaacttcgtcagcgac
ccggccaacggttccgcctcgctgggcctctacgtgatgcccggggcgacggccaccggg
gacgacgcggcgggcaccgtcacggtcaccagcccgaccccggactcgttcctcgtccgc
gacatcggcgggctcttcatcgtctgcggcaagggaatggccgaccgcggactcctcaag
cagggcgccgacggcaccgggatgttcaccctcaccgaggccgtcgccggcgaccactac
acgctcacgcggcgcaaggactacgcctggggacccggcgactggaagaccgatacccgc
ggactgcccgacaccgtcgtgatccgggtcgtcggcaacgagatcaccgccgcgaacctg
ctggcgtccaggcaggtcaacgcggccaccgtgctcggccccgaccagcagcggctgcgc
ggcatgggcctgacagcgcacgacatcgaatccccgttcggcgagctgtggttcaaccag
cgcgccgggaagcccggggcggacgtcgcggtgcggcgagccctgacccaggcgctcgac
ctcggccagctcggccaggtcctcaccagcgggaccggccgcgcgccgaagagcctcctc
gcgcccgggctcggcccgtgcggcggtgacaccatcagcgggctgctgcccgcctccgac
ctggtcgccgtgaagtccgctttggactccgcgggctgggtcgcgggcccggacggcgta
cgcgccaaggacggcaagccgctggcgctcaccttctactacccgtcgacgctcggctcg
accatgcaggcggccgccgaactggtccagcagcgctggtccgcggtcggcgcgcaggtc
accgtcaagggcatgaccgacaccgagtccatgcaggtcctcacgcagggcggctgggac
gcggcgttcgtgccgctcggggtcttcctgccctcccagctcgtcccgttcttctccggc
agcggcggcaacaacttcgccgcggtgcagaaccccgcctacgacgcggcggtccagcag
gcgggcgcgctcgccggcgccgacggctgcggcaagtgggccgaagccgagcaggcgctg
gtgcgggagctcaacgtggtgccgttcgtcaattcggtgcggcccacgttcgtgcagggc
gccacgctcgagacgagccagggcagcatcacccccagctcgatccggatgctcggctga
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