Amycolatopsis methanolica: AMETH_4008
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Entry
AMETH_4008 CDS
T03230
Name
(GenBank) Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
amq
Amycolatopsis methanolica
Brite
KEGG Orthology (KO) [BR:
amq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
amq03000
]
AMETH_4008
Transcription factors [BR:
amq03000
]
Prokaryotic type
Helix-turn-helix
Other families
AMETH_4008
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GAF
HTH_8
HTH_22
HTH_7
HTH_50
nSTAND3
HTH_23
HTH_17
AAA_16
HTH_28
HTH_11
AAA_22
HTH_20
Phage_AlpA
Xre-like-HTH
HTH_IclR
HTH_Tnp_1
HTH_29
HTH_Crp_2
UPF0175
Zeta_toxin
HTH_24
HTH_38
Sigma54_activat
Sigma70_r4_2
AAA_30
HTH_32
Motif
Other DBs
NCBI-ProteinID:
AIJ24100
UniProt:
A0A076MZS4
LinkDB
All DBs
Position
4136445..4137857
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AA seq
470 aa
AA seq
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MVDQRAVLPPRLAASWQRSRQYGVSPETVRPAFTGTVDHDSLFFECGQEVLSGLHTTLAN
EPVSLMLTDSGGLVLSRLCDDSTILRSLDRVHLAPGFSYAERDAGTNGLGLALADRAPSL
VSAEEHYCTGLWGYTCAAAPVLEPGTNRLIGSVNLTTWSKSSKELLLALAQAAAGNTAAL
MLARSHGHLAPPSPRGEVFHVYSDRLPAVAANLSGAWSDALAEARAAMEHERVVCVTGEP
GSGKAALASMARRSVRPRERVLNARPPAPQDAASWLALWTPEVGKADTCVILSGADALPA
YAAEELAALFASARGGFVMTAADHAGVPDALRALVDTVVEVPALRYRPDDVLPLAGHFAR
ESRGRRVTFTPAASRALTAYPWPGNVRQLRQVVREAVSRADVVDTRHLPPEVFTSPGRRL
TRMEAVERDEIVRCLTKPGTTAAQVASMLGMSRATVYRKIAQYGIKVPRR
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atggtggatcagcgggcggtcctgccgccccggctggccgcgtcctggcagcgcagcagg
cagtacggggtgtcaccggagacggtgcggccggcgttcaccggcaccgtcgaccacgat
tcgctgttcttcgagtgcggccaggaggtgctctccggcctgcacacgaccctggccaac
gagccggtcagcctgatgctcaccgacagtggcggactggtgctgagccggctgtgcgac
gacagcaccatcctccgctcgctggaccgcgtccacctggccccgggcttctcctacgcg
gagcgcgacgccggcaccaacgggctcggcctcgcgctggccgaccgcgccccatcgctg
gtctccgccgaggagcactactgcacgggtctgtggggctacacctgcgccgccgcgccg
gtgctggagccgggcacgaaccggctgatcggcagcgtcaacctgaccacctggtcgaag
tcgtcgaaggaactgctgctcgcactggcccaggccgcggcgggcaacacggcggcgttg
atgctcgcccggtcgcacggccacctcgcgccgcccagtccgcgtggcgaggtgttccac
gtctactccgaccggctgcccgccgtcgcggcgaacctgtccggcgcctggtccgacgcg
ctcgccgaagcccgcgcggccatggagcacgagcgcgtggtgtgcgtgaccggcgagccg
ggcagcgggaaggccgcgctggcgtcgatggcccgccggtcggtgcgcccgcgggaacgc
gtcctcaacgcccgtccgcccgcgccgcaggacgcggcgtcgtggctcgcgctgtggacg
cctgaggtgggcaaggccgacacgtgcgtgatcctctccggcgccgacgcgctgcccgcg
tacgccgcggaggagctggccgcgttgttcgcctcggcgcgcggcgggttcgtgatgacg
gccgccgaccatgcgggcgtgccggacgcgctgcgggccctggtcgacacggtcgtcgag
gtgccggcgctgcggtaccggccggacgacgtcctcccgctggccgggcacttcgcgcgg
gagagccgcggccgccgggtcaccttcacgccggccgcctcgcgggcgctgacggcctac
ccgtggccgggcaacgtccgccagctgcggcaggtggtgcgcgaggcggtgtcgcgggcc
gacgtcgtcgacacccggcacctgccgccggaggtgttcaccagcccgggccgccgcctg
acgcggatggaggccgtggagcgcgacgagatcgtacgctgcctgaccaaaccgggcacg
acggccgcgcaggtggcctcgatgctgggcatgagccgcgccacggtgtaccgcaagatc
gcgcagtacgggatcaaggtgccgcgccggtag
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