Amycolatopsis methanolica: AMETH_4253
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Entry
AMETH_4253 CDS
T03230
Symbol
pepD
Name
(GenBank) PDZ/DHR/GLGF domain-containing protein
KO
K04772
serine protease DegQ [EC:3.4.21.-]
Organism
amq
Amycolatopsis methanolica
Brite
KEGG Orthology (KO) [BR:
amq00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
amq01002
]
AMETH_4253 (pepD)
Peptidases and inhibitors [BR:
amq01002
]
Serine peptidases
Family S1: chymotrypsin family
AMETH_4253 (pepD)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Trypsin_2
PDZ_2
Trypsin
PDZ_6
PDZ
Peptidase_S46
Peptidase_S7
PDZ_Tricorn
Motif
Other DBs
NCBI-ProteinID:
AIJ24345
UniProt:
A0A076N0F9
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All DBs
Position
4392705..4393730
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AA seq
341 aa
AA seq
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MTITAVRGGAWIIVAAVVALTSCTEAAQPAAPPTTGAPPATGAVTSVAALAQPSVVKILT
AGGNGSGVVYGADGLILTNEHVVRGAQAVQVAFADGQRVPGTVRAVDVVTDLALVQVART
GLPPARFQPQLPAVGELVVVIGSPLGFENSVTAGVVSGLHREIPGSAAETQALVDLIQTD
APISPGSSGGAVFNAAGEVVGISEAYIPPQAGAVSLGFAIPAATAVDVAEQLMSTGRARH
AFAGLEPAQLTPQIAAQLRLPRADGVIVAAIADGGPAAAAGLRPGDVVTALDGTTVRTPE
EFLGQLRRRAPGDTVTVTFHRAGGQDVRTPLTLTDRPAFSS
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
gtgaccatcaccgccgtcaggggcggggcgtggatcatcgtcgcggcggtggtcgccctg
acctcgtgcaccgaagcggcccagccggcggcgccgcccacgacaggggcgccgccggcg
acgggcgccgtcacttccgtcgcggcgctcgcccagcccagcgtcgtgaagatcctgacc
gcgggcggcaacggcagcggcgtcgtctacggcgccgacggtctcatcctcaccaacgag
cacgtcgtgcgtggcgcgcaggcggtgcaggtcgccttcgccgacgggcagcgggttccc
gggacggtccgcgccgtcgacgtcgtcaccgacctggccctggtccaggtcgcccgtacc
ggcctgccgcccgcgcggttccagccccagctcccggccgtcggtgagctggtcgtcgtc
atcggcagcccgctcggcttcgagaacagcgtcaccgcaggcgtggtgtccgggctgcac
cgcgaaatcccgggcagcgccgccgaaacgcaggcgctcgtcgacctgatccagaccgac
gccccgatcagcccgggcagcagcggcggcgccgtgttcaacgccgccggcgaggtcgtc
gggatcagcgaggcctacatcccgccccaggccggcgcggtgtcgctcggtttcgccatc
cccgccgcgaccgccgtcgacgtcgccgagcagctgatgagcaccggccgggcgcgacac
gccttcgccgggctcgaacccgcccagctcaccccgcagatcgccgcccagctgcgactg
ccgcgagccgacggcgtgatcgtcgccgcgatcgccgacggcggccccgccgcggccgcc
ggcctccggcccggtgacgtcgtcaccgcgctggacggcacaaccgtccgcacgccggag
gagttcctcgggcagctacgccgccgcgcccccggcgacaccgtcaccgtcaccttccac
cgcgccgggggccaggacgtccgaacacccctgaccctgaccgaccgccctgcgttcagc
agctag
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