Amycolatopsis methanolica: AMETH_4554
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Entry
AMETH_4554 CDS
T03230
Symbol
fadB
Name
(GenBank) putative fatty acid oxidation complex alpha-subunit
KO
K01782
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
]
Organism
amq
Amycolatopsis methanolica
Pathway
amq00071
Fatty acid degradation
amq00280
Valine, leucine and isoleucine degradation
amq00310
Lysine degradation
amq00362
Benzoate degradation
amq00380
Tryptophan metabolism
amq00410
beta-Alanine metabolism
amq00640
Propanoate metabolism
amq00650
Butanoate metabolism
amq00907
Pinene, camphor and geraniol degradation
amq00930
Caprolactam degradation
amq01100
Metabolic pathways
amq01110
Biosynthesis of secondary metabolites
amq01120
Microbial metabolism in diverse environments
amq01200
Carbon metabolism
amq01212
Fatty acid metabolism
Module
amq_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
amq00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
AMETH_4554 (fadB)
00650 Butanoate metabolism
AMETH_4554 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
AMETH_4554 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
AMETH_4554 (fadB)
00310 Lysine degradation
AMETH_4554 (fadB)
00380 Tryptophan metabolism
AMETH_4554 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
AMETH_4554 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
AMETH_4554 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
AMETH_4554 (fadB)
00930 Caprolactam degradation
AMETH_4554 (fadB)
Enzymes [BR:
amq01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
AMETH_4554 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
AMETH_4554 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
AMETH_4554 (fadB)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
DAO
NAD_binding_2
AlaDh_PNT_C
Pyr_redox_2
2-Hacid_dh_C
Sacchrp_dh_NADP
XdhC_C
Motif
Other DBs
NCBI-ProteinID:
AIJ24646
UniProt:
A0A076N0N9
LinkDB
All DBs
Position
4684115..4686283
Genome browser
AA seq
722 aa
AA seq
DB search
MSHDHPMFRWETGADGIVTVTMDDPDQSANTMNDRFRRELPALVDHLYAERDSITGVIVT
SAKKTFFAGGDLGMMMRATEDQVEEITGLLDAIKAPLRRLEILGRPVVAAINGAALGGGY
EIALACHHRIVLDVPGATVGLPEVTLGLLPGGGGTTRTVRMFGLRTALQEILLTGRKFRP
AAALETGLVDAVAATPDELLAAARAWIAANPEPAQPWDRPGHRIPGGTPSSPALATVLPS
LPAVLRKQTNGSPAPAPRNVLAAAVEGAQVDFDNALVIESRYCAELICGRISANIIKSMF
FDMQAINRGAGRPDGYPEYRARKLVVLGAGMMGAGIAHVAAKAGVQVVLKDVTREAAERG
KGYSAKILDKAVARGTTTPQRREEILARITPTADTADAEDADLLIEAVFEDPALKKTVIA
ETAKYLTPDALLGSNTSTLPITDLAEGADRPEDFIGLHFFSPVDKMALLEIVVGEKTGDA
ALAKAIDFARQIGKTPIVVNDSRGFFTSRVILEFVNEAIALVGEGVPAASVEQAATQAGY
PVGALALVDELTLTLMRKIREETVAGHRAAGIDKPVHPAAAVIDAMIDEHDRKGRAAGAG
FYDYADGRKQGLWPGLRAAFGGTNTDIPLIDMQERMLFAEALDTVRCFDENVLRSVADAN
IGSILGIGFPAWTGGVIQYINSYRGGLPGFVARARELAARYGDRFTPPESLVRKAENGED
YQ
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atgagccacgaccacccgatgttccgctgggaaaccggcgccgacggcatcgtcaccgtc
acgatggacgatccggaccagtccgcgaacaccatgaacgaccggttccgccgggaactg
cccgcactggtcgaccacctgtacgccgaacgcgactcgataaccggcgtgatcgtcacc
tcggcgaagaagaccttcttcgccggtggcgacctgggcatgatgatgcgcgccaccgag
gaccaggtcgaggagatcaccggcctgctggacgcgatcaaggcgccgctgcggcggctg
gagatcctcggcaggccggttgtcgccgcgatcaacggcgccgcgctcggtggcggctac
gagatcgcgctggcctgccaccaccgcatcgtgctggacgtgcccggtgcgaccgtgggc
ctgcccgaggtgacgctgggtctgctgcccggcggcgggggcaccacccgcacggtgcgc
atgttcgggctgcgcaccgcgctgcaggagatcctgctgaccggccggaagttccgtccc
gcggcggcgctggaaacggggctcgtcgacgccgtcgccgccacgccggacgaactgctg
gccgcggcgcgcgcgtggatcgcggccaaccccgaacccgcgcaaccgtgggaccgcccc
ggtcaccgcatcccgggcggcaccccgtcgagtcccgcactcgccaccgtgctgccgtcg
ctgcccgcggtgctgcgcaagcagaccaacggctcccccgcgcccgccccgcgcaacgtg
ctcgccgccgcggtcgagggcgcgcaggtcgacttcgacaatgcgctggtgatcgagtcg
cggtactgcgccgagctgatctgcggccggatctcggcgaacatcatcaagtcgatgttc
ttcgacatgcaggcgatcaaccgcggcgcgggcaggccggacgggtatcccgagtaccgc
gcgcggaagctggtcgtcctcggcgcgggcatgatgggcgccggaatcgcccacgtggcg
gcgaaagccggcgtgcaggtcgtcctcaaggacgtgacgcgcgaggcggccgaacggggc
aagggctacagcgcgaagatcctggacaaagccgtggcgcggggcaccaccacaccgcag
cggcgggaggagatcctggcccggatcacgccgaccgccgacaccgccgacgccgaggac
gccgacctgctcatcgaggccgtgttcgaggacccggcgctgaagaagaccgtcatcgcc
gagaccgcgaagtacctgaccccggacgcgctgctgggctccaacacctcgaccctgccg
atcaccgatctcgccgagggggccgaccgaccggaggacttcatcgggctgcacttcttc
tcccccgtcgacaagatggcgctgctcgagatcgtggtcggcgagaagaccggtgacgcc
gcgctggccaaggcgatcgacttcgcccgccagatcggcaaaaccccgatcgtcgtcaac
gacagccggggctttttcaccagccgggtgatcctggagttcgtcaacgaggccatcgcg
ctggtcggtgagggcgtgcccgccgcgtcggtcgagcaggcggccacccaggccgggtac
ccggtcggcgcgctcgcgctcgtcgacgaactgacgctgacgctcatgcgcaagatccgg
gaggagaccgtcgccggtcaccgggcggcgggcatcgacaaaccggtccaccccgcggcc
gcggtgatcgacgcgatgatcgacgagcacgaccgcaagggccgcgcggccggcgctggg
ttctacgactacgccgacggccgcaagcagggcctgtggccgggcctgcgcgcggccttc
ggcggcacgaacaccgacatcccgctgatcgacatgcaggagcggatgctgttcgccgaa
gcgctggacaccgtgcgatgcttcgacgagaacgtgctgcgctccgtcgctgacgccaac
atcgggtcgatcctcggcatcggctttcccgcctggaccggcggggtcatccagtacatc
aactcctaccggggcggcctgcccggcttcgtcgccagggcacgcgaactggccgcgcgc
tacggcgaccggttcaccccgccggaatccctcgtccgcaaggcggagaacggagaggac
taccagtga
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