KEGG   Amycolatopsis methanolica: AMETH_4920
Entry
AMETH_4920        CDS       T03230                                 
Symbol
dpo
Name
(GenBank) uracil-DNA glycosylase
  KO
K21929  uracil-DNA glycosylase [EC:3.2.2.27]
Organism
amq  Amycolatopsis methanolica
Pathway
amq03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:amq00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    AMETH_4920 (dpo)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:amq03400]
    AMETH_4920 (dpo)
Enzymes [BR:amq01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.27  uracil-DNA glycosylase
     AMETH_4920 (dpo)
DNA repair and recombination proteins [BR:amq03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     AMETH_4920 (dpo)
SSDB
Motif
Pfam: UDG
Other DBs
NCBI-ProteinID: AIJ25012
UniProt: A0A076N4U3
LinkDB
Position
complement(5072838..5073479)
AA seq 213 aa
MATKTQRTAAEFVPDSRSLDRLRSAALGCQGCDLYRDATQTVFGDGPAPAKVMMLGEQPG
DREDVAGEPFVGPAGRLLDRALEEAGVDRSQVYVTNAVKHFKFVRAERGKQRIHKKPSRG
EIVACRPWLVAELEAVQPSVVVLLGATAASSLMGPSFRVTAHRGELLPAPEEFSGRPERV
LATVHPSSVLRAPDRDEAFAALVKDLRAVPDVI
NT seq 642 nt   +upstreamnt  +downstreamnt
atggccaccaagacgcagcggaccgccgccgagttcgtgcctgacagccgatcgctggac
cggctccgctcggcggcgctcggctgtcagggatgcgacctgtaccgcgacgccacccag
acagtgttcggggacgggcccgcgccggcgaaggtgatgatgctcggcgagcagccgggg
gaccgcgaagacgtcgcgggtgagccgttcgtcggacccgcgggccggttgctggaccgg
gcgctggaggaggccggggtcgaccgctcgcaggtgtacgtgaccaacgcggtcaagcat
ttcaagttcgtgcgggccgagcgggggaagcagcggatccacaagaaaccctcgcgcggg
gagatcgtggcgtgccggccgtggttggtggccgaactggaggccgtgcagccttccgtg
gtggtcctgctgggggcgaccgcggcctcgtcgctgatggggccgtcgttccgggtgacg
gcgcatcgtggggagttgttgcccgcgccggaggagttttccgggcggccggagcgggtt
ctggctaccgtgcatccgtcgtcggtgttgcgggctccggatcgggatgaggcgttcgcg
gcgttggtgaaggatttgcgggctgtgcctgacgtgatatga

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