Amycolatopsis methanolica: AMETH_5142
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Entry
AMETH_5142 CDS
T03230
Symbol
pdhD
Name
(GenBank) dihydrolipoamide dehydrogenase
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
amq
Amycolatopsis methanolica
Pathway
amq00010
Glycolysis / Gluconeogenesis
amq00020
Citrate cycle (TCA cycle)
amq00260
Glycine, serine and threonine metabolism
amq00280
Valine, leucine and isoleucine degradation
amq00310
Lysine degradation
amq00380
Tryptophan metabolism
amq00620
Pyruvate metabolism
amq00630
Glyoxylate and dicarboxylate metabolism
amq00640
Propanoate metabolism
amq00670
One carbon pool by folate
amq00785
Lipoic acid metabolism
amq01100
Metabolic pathways
amq01110
Biosynthesis of secondary metabolites
amq01120
Microbial metabolism in diverse environments
amq01200
Carbon metabolism
amq01210
2-Oxocarboxylic acid metabolism
amq01240
Biosynthesis of cofactors
Module
amq_M00009
Citrate cycle (TCA cycle, Krebs cycle)
amq_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
amq_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
amq_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
amq_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
amq00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
AMETH_5142 (pdhD)
00020 Citrate cycle (TCA cycle)
AMETH_5142 (pdhD)
00620 Pyruvate metabolism
AMETH_5142 (pdhD)
00630 Glyoxylate and dicarboxylate metabolism
AMETH_5142 (pdhD)
00640 Propanoate metabolism
AMETH_5142 (pdhD)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
AMETH_5142 (pdhD)
00280 Valine, leucine and isoleucine degradation
AMETH_5142 (pdhD)
00310 Lysine degradation
AMETH_5142 (pdhD)
00380 Tryptophan metabolism
AMETH_5142 (pdhD)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
AMETH_5142 (pdhD)
00670 One carbon pool by folate
AMETH_5142 (pdhD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
amq04147
]
AMETH_5142 (pdhD)
Enzymes [BR:
amq01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
AMETH_5142 (pdhD)
Exosome [BR:
amq04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
AMETH_5142 (pdhD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox
Pyr_redox_3
DAO
GIDA
FAD_oxidored
HI0933_like
AlaDh_PNT_C
FAD_binding_2
3HCDH_N
NAD_binding_8
2-Hacid_dh_C
Amino_oxidase
Thi4
Trp_halogenase
Motif
Other DBs
NCBI-ProteinID:
AIJ25234
UniProt:
A0A076MWL2
LinkDB
All DBs
Position
5304369..5305742
Genome browser
AA seq
457 aa
AA seq
DB search
MSDAGADLVILGGGSGGYAAAFRAAELGQSVILIEKDKLGGTCLHRGCIPTKALLHAAEV
ADTAREGEQFGVKTTLEGVDIAGVHKYKDGVISRLYKGLQGLAKAHKVTVVEGTGTFVGG
TTVEVDGTRYTGKNLVLATGSYSKTLPGLELGGRIIASDEALTLDWIPEKVVVLGGGVIG
VEFASVWASFGVDVTIVEALPRLVPAEDEFASKQLERAFRRRKINFKTGVKFTGAKQDEN
GVTVSLESGETLEADLLLVAVGRGPNTAGHGYEEAGVRMERGFVITDERLRTNLPNVYAV
GDIVPGLQLAHRGFAQGIFVAEEIAGLEPKAIDEAGIPRVTYSHPEVASVGLSEAAAKER
YGSDVQTFTYDLAGNGKSQILKTSGAIKVIKAPDGPVVGLHLVGDRVGELIGEAQLIYNW
EAFPEDVAPLIHAHPTQTEALGEAHLALAGKPLHVHS
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgacgctggcgccgacctggtgatcctcggtggcggatccggcggctacgccgcg
gccttccgcgccgcggagctgggccagtccgtcatcctgatcgagaaggacaagctgggc
gggacgtgcctgcatcgcggctgcatcccgaccaaggctctgctccacgcggccgaagtc
gccgacaccgcccgcgagggtgagcagttcggcgtgaagaccaccctggagggcgtcgac
atcgccggcgtccacaagtacaaggatggcgtcatcagccgcctctacaaggggctgcag
ggcctggccaaggcccacaaggtgaccgtcgtcgagggcaccggcacgttcgtcggcggc
accacggtcgaggtggacggcacccggtacacgggcaagaacctggtcctggccaccggc
tcgtactcgaagaccctgccgggcctggagctgggcggccggatcatcgccagcgacgag
gcgctgaccctggactggatcccggagaaggtcgtcgtgctcggcggcggcgtcatcggc
gtcgagttcgccagcgtgtgggcctccttcggcgtggacgtgacgatcgtcgaggcgctg
ccgcggctggtcccggccgaggacgagttcgccagcaagcagctcgagcgggcgttccgc
cgtcgcaagatcaacttcaagaccggcgtgaagttcaccggcgccaagcaggacgagaac
ggcgtgaccgtgtccctggagtccggtgagacgctggaggccgacctgctgctggtcgcc
gtcggccgcggtcccaacaccgcgggccacggctacgaggaggccggcgtccggatggag
cgcgggttcgtcatcaccgacgagcgcctgcgcaccaacctgccgaacgtctacgccgtc
ggcgacatcgtccccggcctgcagctcgcgcaccgcggcttcgcccagggcatcttcgtc
gccgaggagatcgccggcctggagccgaaggcgatcgacgaagccggcatcccgcgcgtc
acctacagccaccccgaggtcgcctccgtcggcctgagcgaggcggctgcgaaggagcgc
tacggctcggacgtgcagaccttcacgtacgacctggcaggcaacgggaagagccagatc
ctcaagacttccggcgcgatcaaggtgatcaaggcgccggacgggccggtcgtcggcctg
cacctggtcggggaccgggtcggcgaactgatcggcgaagcccagctgatctacaactgg
gaggccttcccggaggacgtcgctccgctgatccacgcccacccgacccagaccgaggcc
ctcggcgaagcacaccttgccctggccggcaagccactgcacgtgcacagctga
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