KEGG   Amycolatopsis methanolica: AMETH_5205
Entry
AMETH_5205        CDS       T03230                                 
Name
(GenBank) DNA end-binding protein Ku
  KO
K10979  DNA end-binding protein Ku
Organism
amq  Amycolatopsis methanolica
Pathway
amq03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:amq00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    AMETH_5205
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:amq03400]
    AMETH_5205
DNA repair and recombination proteins [BR:amq03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     AMETH_5205
SSDB
Motif
Pfam: Ku
Other DBs
NCBI-ProteinID: AIJ25297
UniProt: A0A076N5N9
LinkDB
Position
complement(5372424..5373281)
AA seq 285 aa
MRSMWKGSVSFGLVTIPINLYAATENKNVSLRQVHVTDGGRIQYKRFCTIDGEEVPYADI
AKGYETDDGEMVVITDEDLKELPLSSSNVIDVLEFVPLEAIDPLHFDRHYYLEPQKAAVK
PYVLLRDALHKSGNVAIAKVALRQRETLALLRVHADVMVMTTMLWPDEVRTPDFGFLRDE
LPQVRPQELSMAGSLIESLSEPVFDPDKYTDQYREALESVIEAKIAGKKTTRPKGRSPKT
DVVDLMAALEASVSEAKKARKPAKRTAAKKPAATPARSRRSPKSA
NT seq 858 nt   +upstreamnt  +downstreamnt
atgcgatcgatgtggaagggctcggtgtcgttcgggctggtcacgatcccgatcaacctc
tacgcggccaccgagaacaagaacgtgtccctgcgccaggtgcacgtcaccgacggcggg
cgcatccagtacaagcgcttctgcaccatcgacggcgaagaggtgccctacgccgacatc
gccaagggctacgagaccgacgacggtgagatggtggtcatcaccgacgaggacctcaag
gagctgccgctgtccagctccaacgtcatcgacgtgctggagttcgtgccgctcgaggcc
atcgacccgctgcacttcgaccgccactactacctggagccgcagaaggccgcggtcaag
ccgtacgtgctgctgcgcgacgcgctgcacaagtccggcaacgtcgccatcgccaaggtc
gccctgcgccagcgggagaccctcgcgctgctgcgcgtgcacgccgacgtgatggtcatg
accacgatgctgtggccggacgaggtgcgcacccccgacttcgggttcctgcgcgacgag
ctgccccaggtgcggccgcaggagctgagcatggccggctcgctcatcgagtcgctgtcc
gagccggtgttcgacccggacaagtacaccgaccagtaccgggaggcgctggaatcggtg
atcgaggcgaagatcgcgggcaagaagaccacccggccgaaggggcgctcgcccaagacc
gacgtggtcgacctgatggccgcgctggaggctagcgtcagcgaggcgaagaaggcacgc
aaaccggccaagcgcacggccgcgaagaagccggccgccaccccggcgcgcagccgccgc
tcgccgaagagcgcctga

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