KEGG   Amycolatopsis methanolica: AMETH_5332
Entry
AMETH_5332        CDS       T03230                                 
Symbol
pdhD
Name
(GenBank) dihydrolipoamide dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
amq  Amycolatopsis methanolica
Pathway
amq00010  Glycolysis / Gluconeogenesis
amq00020  Citrate cycle (TCA cycle)
amq00260  Glycine, serine and threonine metabolism
amq00280  Valine, leucine and isoleucine degradation
amq00310  Lysine degradation
amq00380  Tryptophan metabolism
amq00620  Pyruvate metabolism
amq00630  Glyoxylate and dicarboxylate metabolism
amq00640  Propanoate metabolism
amq00670  One carbon pool by folate
amq00785  Lipoic acid metabolism
amq01100  Metabolic pathways
amq01110  Biosynthesis of secondary metabolites
amq01120  Microbial metabolism in diverse environments
amq01200  Carbon metabolism
amq01210  2-Oxocarboxylic acid metabolism
amq01240  Biosynthesis of cofactors
Module
amq_M00009  Citrate cycle (TCA cycle, Krebs cycle)
amq_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
amq_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
amq_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:amq00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    AMETH_5332 (pdhD)
   00020 Citrate cycle (TCA cycle)
    AMETH_5332 (pdhD)
   00620 Pyruvate metabolism
    AMETH_5332 (pdhD)
   00630 Glyoxylate and dicarboxylate metabolism
    AMETH_5332 (pdhD)
   00640 Propanoate metabolism
    AMETH_5332 (pdhD)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    AMETH_5332 (pdhD)
   00280 Valine, leucine and isoleucine degradation
    AMETH_5332 (pdhD)
   00310 Lysine degradation
    AMETH_5332 (pdhD)
   00380 Tryptophan metabolism
    AMETH_5332 (pdhD)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    AMETH_5332 (pdhD)
   00670 One carbon pool by folate
    AMETH_5332 (pdhD)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:amq04147]
    AMETH_5332 (pdhD)
Enzymes [BR:amq01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     AMETH_5332 (pdhD)
Exosome [BR:amq04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   AMETH_5332 (pdhD)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox Pyr_redox_3 HI0933_like GIDA FAD_oxidored DAO FAD_binding_3 Thi4 FAD_binding_2 NAD_binding_8 Amino_oxidase 3HCDH_N ApbA RecQ-1-like_HTH
Other DBs
NCBI-ProteinID: AIJ25424
UniProt: A0A076MX04
LinkDB
Position
complement(5494295..5495692)
AA seq 465 aa
MSAHFDVVVLGAGPGGYVAAIRASQLGLKTAIVEEKYWGGVCLNVGCIPSKALLRNAELA
HLVTKEAKTFGISSDGPITFDYGAAFDRSRSVADGRVKGVHFLMKKNNIQEFTGRGKFTD
AHTIEVTGENGVETVTFDHCIIAAGATTKLLPGTQLSERVVTYEEQILSRDLPGSIIIAG
AGAIGVEFAYVMHNYGVDVTIVEFLDRMVPLEDADVSKELAKRYKKLGIKVLTGTKVESI
DDSGAKVKVTVSSGGNQQTLEADKVLQAIGFQPRVEGYGLENTGVELTERGAIAVDGRCR
TNVPHIFAIGDVTAKLMLAHAAESMGIVAAETIGGAETMELDYTMIPRATYCQPQVASFG
LTEAQAREQGYDVQVAKFPFTANGKAHGLADAGGFVKILSDAKYGELLGAHLIGPDVTEL
LPELTLAQQWDLTVHEVARNVHAHPTLGEAVKEAIHGLAGHMINF
NT seq 1398 nt   +upstreamnt  +downstreamnt
atgagtgcgcatttcgacgttgtggtgctgggtgccgggcccggcgggtatgtcgcggcg
atccgggcttcgcagctcggcctgaagacggcgatcgtcgaggagaagtactggggcggc
gtgtgcctgaacgtcgggtgcattccgtcgaaggcgctgctgcgcaacgcggagctcgcc
cacctggtcaccaaggaggccaagaccttcgggatcagctcggacgggccgatcaccttc
gactacggcgccgcgttcgaccgcagccgctcggtcgccgacggccgcgtcaagggcgtg
cacttcctgatgaagaagaacaacatccaggagttcaccggccgcggcaagttcaccgac
gcgcacaccatcgaggtcaccggcgagaacggcgtcgagaccgtcaccttcgaccactgc
atcatcgccgcgggcgccaccaccaagctgctgccgggcacgcagctgtccgagcgcgtg
gtcacctacgaggagcagatcctctcccgcgacctgccgggcagcatcatcatcgccggc
gccggcgcgatcggcgtcgagttcgcctacgtcatgcacaactacggcgtcgacgtgacg
atcgtggagttcctggaccgcatggtgccgctcgaggacgccgacgtgtccaaggagctg
gccaagcgctacaagaagctcggcatcaaggtcctgaccggcacgaaggtcgagagcatc
gacgacagcggcgccaaggtcaaggtcaccgtgtccagcggcggcaaccagcagacgctg
gaggccgacaaggtgctgcaggcgatcggcttccagccgcgcgtcgagggctacgggctg
gagaacaccggcgtcgagctgaccgagcgcggcgccatcgcggtcgacggccgctgccgc
acgaacgtgccgcacatcttcgcgatcggcgacgtcaccgcgaagctgatgctggcccac
gcggccgagtcgatgggcatcgtggcggccgagacgatcggcggcgcggagaccatggag
ctcgactacacgatgatcccgcgcgcgacgtactgccagccgcaggtcgcgagcttcggc
ctgaccgaggcgcaggcgcgcgagcagggctacgacgtgcaggtcgccaagttcccgttc
accgcgaacggcaaggcccacggcctcgccgacgcgggtggcttcgtgaagatcctgtcc
gacgccaagtacggcgagctgctcggcgcgcacctgatcggcccggacgtgaccgagctg
ctgcccgagctgacgctggcgcagcagtgggacctgacggtgcacgaggtggcccgcaac
gtgcacgcgcacccgaccctcggcgaggcggtcaaggaggccatccacggtctcgccggg
cacatgatcaacttctga

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