KEGG   Amycolatopsis methanolica: AMETH_5448
Entry
AMETH_5448        CDS       T03230                                 
Symbol
cobD
Name
(GenBank) cobalamin biosynthesis protein CobD
  KO
K02227  adenosylcobinamide-phosphate synthase [EC:6.3.1.10]
Organism
amq  Amycolatopsis methanolica
Pathway
amq00860  Porphyrin metabolism
amq01100  Metabolic pathways
amq01240  Biosynthesis of cofactors
Module
amq_M00122  Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin
Brite
KEGG Orthology (KO) [BR:amq00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00860 Porphyrin metabolism
    AMETH_5448 (cobD)
Enzymes [BR:amq01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.1  Acid-D-ammonia (or amine) ligases (amide synthases)
    6.3.1.10  adenosylcobinamide-phosphate synthase
     AMETH_5448 (cobD)
SSDB
Motif
Pfam: CobD_Cbib
Other DBs
NCBI-ProteinID: AIJ25540
UniProt: A0A076N3Z8
LinkDB
Position
complement(5609076..5609987)
AA seq 303 aa
MTAVGLVAGYALDAAFGDPRRGHPVALFGRAAKALEQRVWADSRARGAAYAVTCVGAAAG
LGVLAQAAARRPFARVAVTALATWTVLGGRGLAAEGEAMAVRLESGDVPAARQRLGHLCG
RDASELDEPGLARAAAESIAENTSDAVVAPLVWGAVAGVPGLLGYRALNTLDAMVGHRTP
RFERFGWAAARGDDLANLLPARLGALATAACARVVGGRPGRSLAVWRRDAARHPSPNAGQ
IEAAFAGALGVRLGGVNTYAGRVEDRGALGDGPAPGAGDLRRAVRLSRAVGLAALALAAA
VAR
NT seq 912 nt   +upstreamnt  +downstreamnt
ttgaccgcggtcggcctcgtggccggatacgcgctggacgcggccttcggtgatccgcgc
cgcgggcatccggtcgccctgttcgggcgcgcggcgaaggcgctggagcaacgcgtctgg
gccgattcgcgggcccgcggcgccgcatacgctgtgacctgcgtcggtgctgcggctggg
ctcggcgttctcgcccaggccgccgcccggcggccgttcgcccgcgtcgcggtgacggcg
ctcgccacgtggaccgtgctcggcggccggggcctggcggcggaaggggaggcgatggcc
gtccggctcgaatcgggcgacgtgcccgcggcccggcagcggctggggcacctgtgcggc
cgcgatgcctccgaactggacgaaccgggcctggccagggccgcggccgagtcgatcgcc
gagaacaccagcgacgccgtcgtcgcgccgctggtgtggggcgcggtggccggggtgccg
gggctgctcgggtaccgggcgctcaacaccctcgacgcgatggtcgggcaccgcacgccg
cgcttcgagcggttcggctgggccgccgcgcgcggtgacgacctcgccaacctgctgccc
gcccgcctcggcgcgctcgccaccgccgcgtgcgcgcgcgtggtgggcggccgccctggc
cggtcgctcgcggtgtggcggcgcgatgccgcgcggcacccgagcccgaacgccgggcag
atcgaggccgccttcgcgggcgcgctcggcgtgcggctgggcggcgtcaacacctacgcc
ggccgggtcgaggaccggggcgcgctcggcgacggcccggcaccgggcgcgggcgacctg
cggcgcgccgtccggttgtcccgcgcggtcgggctggcggcgctagcgctggccgcggcg
gtggcgcgatga

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