Amycolatopsis methanolica: AMETH_5716
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Entry
AMETH_5716 CDS
T03230
Symbol
fadB
Name
(GenBank) 3-hydroxybutyryl-CoA epimerase
KO
K01782
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
]
Organism
amq
Amycolatopsis methanolica
Pathway
amq00071
Fatty acid degradation
amq00280
Valine, leucine and isoleucine degradation
amq00310
Lysine degradation
amq00362
Benzoate degradation
amq00380
Tryptophan metabolism
amq00410
beta-Alanine metabolism
amq00640
Propanoate metabolism
amq00650
Butanoate metabolism
amq00907
Pinene, camphor and geraniol degradation
amq00930
Caprolactam degradation
amq01100
Metabolic pathways
amq01110
Biosynthesis of secondary metabolites
amq01120
Microbial metabolism in diverse environments
amq01200
Carbon metabolism
amq01212
Fatty acid metabolism
Module
amq_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
amq00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
AMETH_5716 (fadB)
00650 Butanoate metabolism
AMETH_5716 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
AMETH_5716 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
AMETH_5716 (fadB)
00310 Lysine degradation
AMETH_5716 (fadB)
00380 Tryptophan metabolism
AMETH_5716 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
AMETH_5716 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
AMETH_5716 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
AMETH_5716 (fadB)
00930 Caprolactam degradation
AMETH_5716 (fadB)
Enzymes [BR:
amq01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
AMETH_5716 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
AMETH_5716 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
AMETH_5716 (fadB)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
ECH_2
3HCDH
NAD_binding_2
F420_oxidored
2-Hacid_dh_C
UDPG_MGDP_dh_N
DAO
NAD_Gly3P_dh_N
ThiF
NAD_binding_8
Motif
Other DBs
NCBI-ProteinID:
AIJ25808
UniProt:
A0A076MYS9
LinkDB
All DBs
Position
complement(5887614..5889782)
Genome browser
AA seq
722 aa
AA seq
DB search
MIMTNTIRWDQDSDGIVVLTLDDPNQSANTMNADFRESFKNTVERLESEKDSITGVVITS
AKKTFFAGGDLRDLIQATPEHAAEITESTNAMKAQLRKLETLGKPVVAAINGAALGGGLE
IALATHHRIVADVPGTVIGLPEVTLGLLPGGGGVARTVRLLGIQSAVLNVLVQGQRHKPA
KALELGLVHEVVSSVDELLPKAKEWVKANPEAQQPWDVKGYKMPGGSPSNPKFAANLPAF
PANLRKQLKGAPMPAPRAILAAAVEGAQVDIETATQIETRYFVSLVTGQVAKNMTKAFFF
DLQHINSGGSRPDGYEKYQAQKVGVLGAGMMGAAIAYVSAKAGIEVVLKDVSLEAAEKGK
GYAVKLEEKALSRGKTTKEKSDALLARIKPTADPADFAGVDFVIEAVFESQELKHKVFGE
IENIVNPDAVLGSNTSTLPITGLAQGVQRQEDFIGIHFFSPVDKMPLVEIIRGEKTSDAT
LAKVFDYTLQIKKTPIVVNDSRGFFTSRVIGTFINEAVAALGEGVEPASIEQAGSQAGYP
APPLQLMDELTLTLPRKIREETKSAIEAAGGTWKAHASEAVIDRMIDEFDRKGRSSGAGF
YEYDENGKRVGLWPGLREAFKSGSGNVPFKDLQERMLFAEALETVRCFDEGVLTSVQDAN
IGSIFGIGFPAWTGGVIQYINQYEGGLPGFVARAKELAEKYGEHFQPPESLVKKAEAGER
FE
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
gtgatcatgaccaacactattcgctgggaccaggactccgacggcatcgtcgtgctcacc
ctggacgaccccaaccagtcggcgaacacgatgaacgccgacttccgcgagtccttcaag
aacacggtcgagcggctggagtccgaaaaggactcgatcaccggtgtcgtgatcacctcg
gcgaagaagaccttcttcgcgggtggtgacctgcgcgacctgatccaggccacgccggag
cacgcggccgagatcaccgagagcaccaacgccatgaaggcccagctgcggaagctggag
acccttggcaagccggtcgtggccgccatcaacggtgccgcgctcggcggtggcctggag
atcgcgctggccacgcaccaccggatcgtcgcggacgtgccgggcaccgtcatcggcctg
cccgaggtgacgctgggcctgctgcccggcggcggtggcgtggcgcgcaccgtgcggctg
cttggtatccagagcgccgtgctgaacgtgctggtgcagggccagcggcacaagccggcg
aaggcgctggagctgggcctcgtgcacgaggtcgtgtccagtgtggacgagctgctgccg
aaggccaaggagtgggtgaaggccaaccccgaggcgcagcagccgtgggacgtcaagggc
tacaagatgcccggcggttccccgtcgaacccgaagttcgcggcgaacctgcccgcgttc
ccggcgaacctgcgcaagcagctcaagggcgccccgatgcccgcaccgcgcgccatcctg
gccgccgcggtcgagggcgcgcaggtcgacatcgagaccgcgacgcagatcgagacccgg
tacttcgtcagcctggtcaccggtcaggtcgcgaagaacatgacgaaggcgttcttcttc
gacctgcagcacatcaactccggcggctcgcggccggacgggtacgagaagtaccaggcg
cagaaggtcggcgtgctcggcgcgggcatgatgggcgccgcgatcgcctacgtgtcggcg
aaggccggtatcgaggtcgtgctcaaggacgtctcgctggaggcggccgagaagggcaag
ggctacgcggtcaagctcgaagagaaggcgctgtcccggggcaagaccacgaaggagaag
tcggacgcgctgctggcgcgcatcaagccgacggccgacccggcggacttcgccggggtg
gacttcgtgatcgaggccgtgttcgagagccaggagctcaagcacaaggtcttcggcgag
atcgagaacatcgtcaacccggacgccgtgctcgggtcgaacacctccacgctgcccatc
accggcctcgcgcagggcgtgcagcggcaggaggacttcatcggcatccacttcttctcg
ccggtcgacaagatgccgctggttgagatcatccgcggggagaagacctcggacgccacc
ctggcgaaggtcttcgactacaccttgcagatcaagaagacgccgatcgtggtcaacgac
agccgcggcttcttcaccagccgggtgatcggcacgttcatcaacgaggcggtcgccgcg
ctcggcgaaggtgtcgagccggcgtcgatcgagcaggccggttcgcaggcaggctacccg
gcgccgccgctgcagctgatggacgagctgacgctgaccctgccgcggaagatccgcgag
gagaccaagtcggcgatcgaggcggccggcggcacctggaaggcgcacgcctccgaggcg
gtcatcgaccggatgatcgacgagtttgaccggaagggccggtcgtctggtgcgggcttc
tacgagtacgacgagaacggcaagcgcgtcggactgtggcccggtctgcgcgaggcgttc
aagtccggcagcggcaacgtgccgttcaaggacctgcaggagcgcatgctgttcgccgag
gcgctggagacggtccgctgcttcgacgagggcgtgctgacgtcggtgcaggacgccaac
atcggctcgatcttcggcatcggtttcccggcgtggaccggcggtgtcatccagtacatc
aaccagtacgagggcggcctgcccggtttcgtggcaagggcgaaggagctggccgagaag
tacggtgagcacttccagccgccggagtcgctggtgaagaaggccgaagccggcgaaagg
ttcgaataa
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