Amycolatopsis methanolica: AMETH_6590
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Entry
AMETH_6590 CDS
T03230
Symbol
holB
Name
(GenBank) DNA polymerase III
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
amq
Amycolatopsis methanolica
Pathway
amq03030
DNA replication
amq03430
Mismatch repair
amq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
amq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AMETH_6590 (holB)
03430 Mismatch repair
AMETH_6590 (holB)
03440 Homologous recombination
AMETH_6590 (holB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
amq03032
]
AMETH_6590 (holB)
03400 DNA repair and recombination proteins [BR:
amq03400
]
AMETH_6590 (holB)
Enzymes [BR:
amq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AMETH_6590 (holB)
DNA replication proteins [BR:
amq03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AMETH_6590 (holB)
DNA repair and recombination proteins [BR:
amq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AMETH_6590 (holB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
AAA_22
DNApol3-delta_C
AAA_16
AAA_5
Mg_chelatase
Motif
Other DBs
NCBI-ProteinID:
AIJ26682
UniProt:
A0A076N9H7
LinkDB
All DBs
Position
complement(6745538..6746746)
Genome browser
AA seq
402 aa
AA seq
DB search
MTAVVAPAGVWGQLVGQDHAVDVLSAAARAAAQIVAGEPAPPGAMTHAWLLTGPPGSGRS
VAARAFAAALQCITGTGCGQCPGCRTAMHGTHADVRLVIPEGLSISVAEMRALVQAAARR
PTTGQWQVVIIEDADRLTEGASNALLKAVEEPPERTVFLLCAPSDHPEDISVTIRSRCRL
VTLRTPAAEAIARVLVERDGVDPELAEWAASVCGGHVGRARRLATDDNARKRRAAVLRIP
LGLSRPGDVFRCADDLIAAAEADATEESKERDEAEKAELRNAMGGDATGKGVAGAKRAAE
AAVKQLEKRQKSRATRTQRDTLDLALVDLAGFYRDVLVAVSGADARYNHPDHAQDIEQAA
RQWTAESTLKRLEAVLACREAILWNVKPRIAVEAMLTALRHG
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgctgtcgtcgcgccggccggggtgtggggccagctggtcgggcaggaccacgcc
gtcgacgtgctgtccgcggcagcgcgggcggcggcgcagatcgtcgcgggcgagcccgcg
ccgccgggcgcgatgacgcacgcctggctgctcaccggcccgcccggttccggccggtcg
gtggccgcccgcgcgttcgccgcggccctgcagtgcatcaccggcaccggctgcggccag
tgccccggttgccgcacggcgatgcacggcacacacgccgacgtgcgcctggtcatcccg
gagggcctgtcgatctcggtcgcggagatgcgtgcgctggtccaggccgcggctcgccgc
ccgacgacggggcagtggcaggtcgtgatcatcgaggacgccgaccggttgacggaaggc
gcgtcgaacgccctgctcaaggcggtcgaggagccgccggagcggacggtgttcctgctg
tgcgcgccgtcggaccaccccgaggacatctcggtcacgatccgttcccggtgccgtctg
gtgacgctgcggacgcccgccgcggaggcgatcgcccgcgtgctggtcgagcgggacggc
gtcgacccggagctggcggaatgggcggcgtcggtgtgcggcggtcacgtcggccgcgcg
cggcgcctggccacggacgacaacgcccgcaagcgccgggccgcggtgctgcggatcccg
ctgggcctgtcgcgtcccggtgacgtgttccgctgcgccgacgacctgatcgcggccgcc
gaagcggacgcgacggaggagagcaaggaacgcgacgaggccgagaaggcggagctgcgc
aacgcgatgggcggcgacgcgaccggcaagggcgtcgccggcgccaagcgcgcggccgaa
gcggcggtcaagcagctggagaagcgccagaagtcccgggcgacccgcacccaacgcgac
acgctggacctcgcgctggtcgacctcgcgggcttctaccgggacgtgctggtggcggtg
agcggcgccgacgcccgctacaaccaccccgaccacgcccaggacatcgagcaggccgca
cgccagtggacggcggagtcgacgctgaagcgcctggaagcggtgctggcctgccgcgaa
gcgatcctgtggaacgtcaagccgcggatcgcggtggaggcgatgctgacggccctgcgc
cacggctga
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