Acaryochloris marina: AM1_0525
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Entry
AM1_0525 CDS
T00617
Symbol
fliA
Name
(GenBank) RNA polymerase sigma factor
KO
K03090
RNA polymerase sigma-B factor
Organism
amr
Acaryochloris marina
Brite
KEGG Orthology (KO) [BR:
amr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
amr03021
]
AM1_0525 (fliA)
Transcription machinery [BR:
amr03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
AM1_0525 (fliA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r4_2
Sigma70_r3
Sigma70_ECF
HTH_Crp_2
HTH_17
SpoIIID
HTH_3
MarR_2
HTH_24
HTH_23
DUF134
KORA
Xre-like-HTH
HTH_8
DUF3670
Motif
Other DBs
NCBI-ProteinID:
ABW25577
UniProt:
B0CC35
LinkDB
All DBs
Position
complement(501625..502419)
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AA seq
264 aa
AA seq
DB search
MTATLTNNLKSESLELLQQYQQSSCTELRNRLVQMNLGLVRREAHRWVGHSTESFDDLMQ
VGSLGLIRAIERFDPFKGHAFSSFAVPYIRGEIQHYLRDKSPQVRIPRKWHELQRQAINV
TREMRDELQRQPTDVEVAAALDICQKEWQEVKLASCNRSVLSLDAPVHNSEQESMSLGEL
LPDRHYHSFQLAQEDQIRLRQALSKLEKRTSDVLEFVFFHDLTQKETAEVLGISAVTVSR
QVKKGLVALRQMLKGSEETAEKTV
NT seq
795 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcaactcttactaataatcttaaaagtgaaagcttggagttattgcagcagtat
caacagtcttcatgcactgagttgcgaaatcgcctcgtacagatgaatttgggattagtc
aggagagaggctcatcgctgggttggccattccactgaaagttttgatgatttaatgcag
gtaggttcccttggcttaattcgagccatcgaacggtttgacccctttaaaggacatgcc
tttagttcctttgcagttccctacatccgaggagagattcaacattatctgcgagataaa
agtcctcaggttcggatccctcgcaaatggcacgaactccaacggcaggccattaacgtg
acccgggaaatgagggatgaattacaacggcaacctacggacgttgaggtagctgcagcc
ttagacatttgccaaaaggaatggcaagaagtaaagctggcatcttgcaatcgctcagtt
ttaagccttgatgctccagttcataattctgagcaagaatccatgtctttgggtgagcta
ctgcctgatcgccactatcatagttttcagctcgctcaagaagatcaaattcgattgcgc
caagccttatctaagttagaaaagcgaacttcggatgtcctagagtttgtctttttccat
gacttaactcaaaaggaaacagctgaagtcttgggtatcagtgcggtgacggtctctcgt
caagtcaagaaagggttagttgctctccgccaaatgttgaaaggctctgaagagacagca
gagaaaaccgtttag
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