Acaryochloris marina: AM1_2891
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Entry
AM1_2891 CDS
T00617
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
amr
Acaryochloris marina
Pathway
amr03410
Base excision repair
amr03430
Mismatch repair
amr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
amr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AM1_2891 (recJ)
03430 Mismatch repair
AM1_2891 (recJ)
03440 Homologous recombination
AM1_2891 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
amr03400
]
AM1_2891 (recJ)
DNA repair and recombination proteins [BR:
amr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
AM1_2891 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
AM1_2891 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
AM1_2891 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHH
DHHA1
Motif
Other DBs
NCBI-ProteinID:
ABW27890
UniProt:
B0CAF5
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All DBs
Position
2930124..2932511
Genome browser
AA seq
795 aa
AA seq
DB search
MPKPSFPQQRWQIADPEHTLVDKIAIATGLSPLLAAVLANQGIGSVEAAQQFLAPESQSL
PSPLEAFPDLAASLTLLQDAIASRHKIAICGDYDADGMTSTALLLRVLRALGADVDYAIP
SRMQEGYGINQRIVEEFAADNVTLVLTVDNGIAAYDPIVRARELGLTVIITDHHDLPPQL
PPANAILNPKLVPEDSPYRGLAGVGVAYVLATLLAQEQGNTTLITPLLELFTLGTIADLA
PLVGVNRRWLQRGLALLPHSRLAGVQSLMQVSGCVSADQALKPDAIGFRLGPRINAVGRI
ADPQTVIELLTTDDPGIAFARAMQCEQANQHRRQLCADIEIEAIELVETLVRQGKAPWQP
EGDWVIMLVHPGWHHGVIGIVASRLVERYGLPVFIATYEAEDHTHIRGSARGIPEFDVFA
ALQACDEALGRYGGHRAAGGFSLATDQLEKMRSHLRTYAHQTLQIDQLKPLVTVDAQASF
TQIDWDLYEQINQLHPCGIGNPEPIFWTANVEVVEQRPVGKDKSHLKLTLAHTESDDRQQ
LIKGMAWRWGTYYPLPQRIDVAYRLRENTWNQQTNLELEILGIREPVVDPPHSLSRTPIV
VAQADKGAPVVRQQVALHCPEPDVSPTLLQAIEWSSLGDWPQVLQGISGHILMYGYQRPY
VSTTTLPGTVEYDRPSRSCDCLILWSLPPSWTHLRWLLALARPQQIYIRNHSPAILPAEE
LKAKLKFEIAKNGDDPLNLLNLGQQWWVAPSTIVSAFREIGYPCSDFPETGVLEQELKRL
QRWYHCSANRLAGLT
NT seq
2388 nt
NT seq
+upstream
nt +downstream
nt
gtgcctaaaccatcttttccacagcaacgctggcaaattgctgatccagagcacactcta
gtagacaagattgcgatcgcaactggattatcgcctcttttggccgcagtattagccaac
caagggatagggtctgtcgaagcggctcaacagtttttggcaccagagtcccagagctta
ccctctcctcttgaagcattcccggatttggctgctagcttaacgttgttacaggatgcg
atcgcatctcgacacaaaattgccatctgtggcgactatgatgcagacggcatgaccagc
acggctctactactgcgcgtcctgagagcattgggtgctgacgtagactatgcgatacca
agccgcatgcaggaaggctacggcattaaccaacggatcgtcgaggaatttgcggcagat
aacgtgacgctggtgttaaccgtagacaacggtattgccgcctatgaccctattgtgaga
gcccgcgaactgggattaaccgtcatcatcacggatcaccatgatctgccgcctcagctc
cccccggccaacgccattctcaatcccaaattagtgccagaagactccccttatcgaggg
ttagcaggggtgggggtcgcttatgtcttagccaccctactcgcccaagagcaaggtaat
accaccctgattacccctctactagaactgtttaccctgggcaccattgctgatttggct
cccttagtgggggtcaatcgccgctggctacagcgaggtttagccctcttgccccactct
cgattagcaggggtacagtctttgatgcaggtgtcgggctgtgtctctgccgatcaagcc
ctcaaaccggacgctattggcttccgactcggtccccgcatcaatgccgtgggccggatt
gccgatccacaaacggtaattgagctattaacgactgacgacccaggcatcgcgtttgcc
cgagccatgcagtgtgagcaggctaaccagcatcgacgtcagctctgtgccgacattgag
atagaggcgatcgaactcgttgaaacccttgtccgacaggggaaagcgccgtggcaacca
gagggcgattgggtgattatgctggttcatcccggttggcatcatggcgtgattgggatt
gtggcgtctcggttagtggaacgctacggactaccggtttttattgccacctatgaagca
gaagaccatacccatatccgtggatccgcccgagggattcctgaatttgatgtgtttgca
gccctacaagcctgtgatgaagccttaggtcgctatgggggccaccgagcagcaggcgga
ttttccttagcaaccgaccagttagagaagatgcgatcgcacctgcgtacctacgcccac
caaaccttacagatagatcagctcaagcctctggtaacggtcgatgcccaagccagcttc
actcagatcgattgggatctctacgagcaaattaatcagctgcatccctgcggtattggc
aatccagaaccgattttttggaccgccaatgttgaagtggtagagcagcgacccgtgggc
aaggacaaaagccatttaaagctcaccctagctcatactgaatcagacgatcggcagcag
ttgattaaagggatggcatggcggtggggcacctattatcctttaccccagcggatcgac
gttgcctatcgccttagagaaaatacttggaaccagcaaaccaatttggagctggaaatt
ttagggattcgggagcccgttgtagacccaccccactcactatctcgtactccaattgtg
gttgcccaagccgataaaggggcacccgttgttcgccagcaagtggccttacactgtcca
gagcccgacgtatcacccacactactacaagccatagagtggtcgagcttgggggattgg
cctcaagtcctacaaggcattagcggtcatattctcatgtatggttatcagcgtccctat
gtatcgacgacaaccctgcccggaacggtggaatacgaccggcctagccgttcctgtgac
tgtctaattctatggtctttgccgccttcatggacccatttacgctggttattagccttg
gctcggccccagcaaatttatattcgcaaccatagtccagcaattttgccagcagaggaa
ttaaaggcaaaactaaagtttgaaatagcaaaaaacggtgacgacccccttaacttactg
aacttaggccagcaatggtgggttgcaccgagtacaattgtttctgcttttagagaaata
ggttacccctgctctgatttcccggagacgggtgtgttagagcaggagttaaaacgcttg
caacgttggtatcattgttcagccaatcgattggcagggttaacctag
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integrated database retrieval system
