Acaryochloris marina: AM1_4810
Help
Entry
AM1_4810 CDS
T00617
Name
(GenBank) exoribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
amr
Acaryochloris marina
Brite
KEGG Orthology (KO) [BR:
amr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
amr03016
]
AM1_4810
Enzymes [BR:
amr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
AM1_4810
Transfer RNA biogenesis [BR:
amr03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
AM1_4810
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
HTH_RNase_II
CSD_RNase_II
RNase_II_C_S1
Motif
Other DBs
NCBI-ProteinID:
ABW29782
UniProt:
B0C2J2
LinkDB
All DBs
Position
complement(4846879..4848921)
Genome browser
AA seq
680 aa
AA seq
DB search
MEKGTLIEFKRRGDCAEGQRPFQLGVLDRPEGKKNWVVVDQTGQTHTLHPRQFTFVVSGK
TYTPSEIAEFQSEAESYIDPSSLEVAWEILLEDSQSVAPADLAQLLFSDQSPPLCYASHC
LLSDDRIYFKQKGDCFEPRSASQVAELQHQLEQQAKRQQEQQAFYQKLEQAIAGDTVEWQ
GCDRTYLQALEKFAALGDEATTRSTATEVLSTLKRGTSPDAAFQLLVDVKVWDPHQNLHL
YRSKTPVQFSSSVLAAVDQLLKMPPPDLHAERHDLTSLKVYTIDDESTSEIDDGLSLEFL
PDGKQRVWVHIADPSRWITLGDELDQEAQRRGTTVYLPTGMIPMFPTELSTGPMSLVQGQ
ICCALSFGVILTAEGAIESYEIRCSQVQPTYRLTYADVDEMLELGVEAESELLALAQWAK
QRQAWRKSQGAISIQMPESSIKVEGEKVDIQVLYDSSARNLVAEMMILTGEVAARYGQDN
DLPLPFRHQPQPELPPEEELLQLAPGFVRYCAIRSCMPRSEVSISPARHASLGLDCYCQV
TSPIRRYADLVAHFQIKAHLRDEELPFSKTDLTTLIPSVTTAAYEATLLERQTNRYWSLE
YLRQHGQTVWPAMVLRWLREHENLALILLEDLGLELVMRLDHPVVLGDRLDVKVASVNPR
LDRIQLQECFTASPDDAQEG
NT seq
2043 nt
NT seq
+upstream
nt +downstream
nt
gtggagaaaggaacattaattgaattcaaaagacggggcgattgtgccgaagggcagcgt
ccctttcaattgggcgtattagatcgacctgaaggaaagaagaactgggttgttgttgat
caaacgggacaaacccacacgcttcatcctcgacaattcacctttgtggtttcggggaaa
acctatacgccctctgagattgctgaatttcagtcagaggctgagtcctatattgatcca
agcagcctagaagtcgcttgggaaatcctactggaagactcccagtccgttgcgcctgcc
gatttggcccagctattgttttcggaccaaagcccgcctctttgctacgcctctcactgc
ctattaagcgatgaccgcatttactttaagcagaaaggggattgctttgagccccgttct
gctagccaagttgcagaactccagcatcagcttgagcagcaagccaaacgtcagcaagaa
caacaagctttttatcaaaaactagagcaagcaatcgcgggtgataccgtagagtggcaa
ggatgcgatcgcacctatctccaagcattggaaaagtttgctgctttaggagatgaggcc
accactcgttcaactgccactgaagtattgtcgaccttgaagcgaggcacctcgccagat
gcggcttttcagttgttagtcgatgtgaaggtctgggatcctcaccaaaatttacatctg
tatcgcagcaaaactccagttcaattttcgtcgtctgttctcgctgccgttgatcaattg
ctgaaaatgccgccaccagacttacatgctgaacgtcacgacttgaccagtttgaaagtc
tataccattgatgatgaaagcacgtccgagatcgatgatggtcttagcttagaatttctc
ccagacggtaaacagcgggtctgggtccatattgctgaccccagtcgctggatcactcta
ggcgatgaattagaccaagaagctcaacgccgagggacaacggtttacttacccacgggc
atgattcccatgttcccaacggaactatcgacgggacccatgagtttggttcagggacaa
atctgttgtgccctcagctttggcgtcatcctcaccgcagaaggggcgattgaatcctat
gagattcgctgtagccaggtccagcctacctatcgcctcacctatgctgatgtggatgaa
atgctggagcttggagtagaggcagagtctgaactattagctttggcccaatgggccaaa
caacgccaagcctggcgtaaatcccaaggcgctatcagcattcagatgccggaatcctcc
atcaaagtggagggagagaaggtcgacattcaggttctgtacgattcttctgcccgtaac
ctagtcgctgaaatgatgatcttaacgggggaagtggccgcccgttatggtcaagataat
gatttaccattgccctttcgccaccagcctcagcctgaactgccgccggaagaagagcta
ttacagcttgcaccaggatttgttcgctattgcgcgattcgtagctgtatgcctcgcagt
gaggtcagcattagtcccgctcgtcacgccagcttgggcctggattgttactgccaagtc
acgtcccccatccgtcgctatgcagatttagttgctcattttcaaattaaggctcatctt
cgagacgaagaattgccctttagtaaaacggacttaacaaccctcatacccagcgtgact
accgccgcctatgaggccacccttttggaacggcaaaccaatcgctactggagtttggag
tatttacgacaacatggtcagacggtctggccggcaatggtgctgcggtggttgcgcgaa
catgaaaatttagccctaattttgctagaagatttaggactggaactggtgatgcgcctg
gaccacccggttgttttgggggaccgactggatgtcaaagtggcctctgtaaatccccga
ttagatcggattcagctgcaagaatgttttactgcttcgcctgatgatgctcaggaagga
tag
DBGET
integrated database retrieval system
