Acaryochloris marina: AM1_5034
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Entry
AM1_5034 CDS
T00617
Name
(GenBank) helicase, RecD/TraA family
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
amr
Acaryochloris marina
Pathway
amr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
amr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
AM1_5034
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
amr03400
]
AM1_5034
Enzymes [BR:
amr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
AM1_5034
DNA repair and recombination proteins [BR:
amr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
AM1_5034
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
OB_YrrC
SH3_13
UvrD_C_2
HHH_5
AAA_11
Viral_helicase1
PIF1
nSTAND3
PhoH
SLFN-g3_helicase
NAT10_TcmA_helicase
UvrD-helicase
AAA_22
DNA_pol_lambd_f
DEAD
Mg_chelatase
TraI_hel_assoc_N
TsaE
NPHP3_N
UvrD_C
AAA_5
HHH_2
AAA
T2SSE
SQS_PSY
TrwB_AAD_bind
AAA_16
NACHT
Sigma54_activat
AAA_28
PSI_PsaH
Motif
Other DBs
NCBI-ProteinID:
ABW30000
UniProt:
B0C5Y8
LinkDB
All DBs
Position
5080585..5082816
Genome browser
AA seq
743 aa
AA seq
DB search
MTYEAAHPTHPPTEQLQGVVERLTYHSDESGYTVARFKAPRTRELITIVGSFANIQAGQT
LQVQGIWRDHPKYGAQFQVKQYQETKPATLTGIEKYLGSGLIKGVGPVTAKRIVAHFGLE
TLDIIENQIERLVEVPGIAKKRVKLIQTAWDSQKTIKEVMVFLQGHGVSTTYAVKIFKQY
GDEAIDIVTQNPYRLATDVYGIGFITADQIARSLGIPPHSEYRYRSGLLHVLSESADEGH
CYLPQPELITRAVKRLALPEYQPKPDQVEYLIHAMVADAELIVEQFEREDATELLCYAPP
FFRAEFHLSRRLLQLLANPLEVDQGRVRRWLDRFMEQTNVHLSEQQQQAVELAASQRVVI
LTGGPGTGKTFTTRTIVALWKAMGKEIVLASPTGRAAQRLSEVTGHEAKTIHRLLEFDPK
TMKFQRDVDHPIPADAVVIDEASMLDLFLANSLIKAIDTNAQLLLVGDTDQLPSVGPGNV
LLDLITAQRIPVMELTEVFRQAQASQIIQNAHQINQGKFPHLESVSPAPKTDCLWLGAPE
PEQGQQAIQELINDLIPQLGYVAARDVQVLCPMTRGEVGTRKLNQVLQALINPPSPSKAE
LTRGGLILRVGDRVLQQVNDYNREVFNGDMGVIEAINLEEVAVTVRYAERSVSYDLADLN
EIGLAWAVTIHKSQGSEYPVVILPMYMQHYIMLSRNLLYTGLTRAKKLAILVGPKNAISM
AIRQVKDKQRYTLLDKRLSFVAQ
NT seq
2232 nt
NT seq
+upstream
nt +downstream
nt
atgacctacgaggccgctcatccgactcatcccccgaccgaacagttacaaggggttgta
gagcggctaacctatcattccgatgaatcgggatataccgtggcccgcttcaaagcccct
agaacccgtgagttaatcaccattgtgggcagctttgctaatatccaagcgggccaaacc
ctccaagttcaggggatttggcgggatcatcctaaatacggcgctcaatttcaagtcaaa
caataccaagaaacgaaacccgctaccctgacggggattgaaaagtacctcgggagtggc
ttaattaagggcgtgggtccggtcaccgccaagcgcatcgtcgctcattttggcctagaa
accctggatattattgagaaccagattgagcgcctagttgaagtccccggcattgccaag
aagcgagtcaaactgattcagaccgcttgggacagccagaaaaccatcaaagaggtgatg
gtgttcctccagggccatggtgtctccactacctatgctgtcaaaatctttaagcagtat
ggagacgaagccatcgatatcgtcacccagaatccctaccgactggcaacggatgtctat
ggcattggctttatcactgccgatcaaattgcccgtagcttaggcattcctcctcactca
gagtatcgctatcgcagtggcctcctacatgtccttagcgagtccgccgatgaagggcat
tgttatctacctcaacctgagctgatcactcgggccgtaaagcgattggccctccccgaa
tatcagcccaagcccgatcaagtggaatatttgatccatgccatggtcgcggacgctgag
ctgattgttgaacagtttgaacgggaggatgcaacggaattgttgtgctatgctcctccc
ttctttcgagcggagtttcatttgtctcgccgattactccaattactcgccaatccccta
gaagtcgatcagggtcgagtccgtcgttggctcgatcggtttatggaacaaacgaatgtc
catctctcggagcaacagcagcaggctgtggagttggccgctagccagcgagttgtcatt
ctcacgggtggaccgggcacggggaagacctttaccacccggaccattgtcgccctctgg
aaagccatggggaaagagattgtattggcttctcccaccggacgagctgcccagcgactc
agcgaagtaacgggtcacgaagcgaaaaccatccatcgccttttagagtttgaccctaaa
accatgaagtttcagcgggatgtagaccaccccattcctgctgatgcggtggtgattgat
gaagcatccatgctggatttgtttctagccaattccctaattaaagccattgataccaat
gcccaactgttgctcgtgggggatacggatcagctacccagcgtcggacccggaaatgtg
ctgctggatctgattaccgcccagagaattcccgtcatggaactaacagaggtttttcgt
caagcccaagccagtcaaattatccaaaatgctcatcagattaaccaaggcaagttcccc
catctagagtctgtcagccctgcgcccaagacggattgtctctggcttggggcacctgag
ccggagcagggtcagcaagcgattcaagaactcatcaatgatctgattccgcaattggga
tatgtggcggcacgagatgtgcaggtcctttgtcctatgaccagaggagaggtggggact
cgcaagctgaatcaagttctgcaggcattgattaatccccctagtccgagtaaagctgag
ttaacccgaggggggctgattcttagggtgggcgatcgcgtacttcaacaggtcaatgat
tacaatcgcgaggtcttcaatggcgatatgggggtgatcgaggcgattaatctagaagag
gttgccgtgacggttcggtatgctgagcggtctgtttcttatgatctggcagacttaaat
gaaatagggttggcttgggccgtcacgattcataagagccaggggtcagaatatcccgtt
gtgatcctgcctatgtatatgcagcattacattatgctgagccgcaatctgctctacaca
ggtttgacgagggctaagaaactggcgattctagtgggtcccaaaaatgcaatcagcatg
gcgattcgacaggtgaaggataagcagcgatataccttgctggacaagcggttgagcttt
gttgctcagtga
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