Acaryochloris marina: AM1_5150
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Entry
AM1_5150 CDS
T00617
Name
(GenBank) ATP-dependent DNA helicase, RecQ family
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
amr
Acaryochloris marina
Pathway
amr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
amr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AM1_5150
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
amr03019
]
AM1_5150
03400 DNA repair and recombination proteins [BR:
amr03400
]
AM1_5150
Enzymes [BR:
amr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AM1_5150
Messenger RNA biogenesis [BR:
amr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
AM1_5150
DNA repair and recombination proteins [BR:
amr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
AM1_5150
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
RecQ_Zn_bind
Cas3-like_C_2
AAA_22
T4SS-DNA_transf
Motif
Other DBs
NCBI-ProteinID:
ABW30112
UniProt:
B0C8F7
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All DBs
Position
5212149..5213615
Genome browser
AA seq
488 aa
AA seq
DB search
MRLDHSQAWDRAIAGLQKFWGYSQFRPLQGEAVTSLLKHQDALVMLPTGSGKSVCFQLPA
LLQSGLTIVISPLIALMEDQVQALQAKKLPAGMIHSQLSSQKRRQTLRQIEQQQLRLLYL
SPESLLSPPIWQRLGDPHLQIRCLIVDEAHCIEQWGSSFRPVYRRLGSIRDALLPKNSAA
PITVAAYTATAKPTTQAAIQTVLRLHQPQVLSCSPYRNNLDLTVEVAWTPACRRQKLLAF
IGRQAHSAGLVYTSSRRLCESLAAWFCQQHQPTVAYHAGLSAPERRRIEAQWLQGKLPFV
ICTSAFGMGIDKPDVRWIAHYHPPLSLSAYLQEIGRAGRDNLRSQTLLLTSEPTGWLDPQ
DRQMRQYFLKQLRGQQASAQRLVHRLPRQGHIDTITKAFPEADLALALLHQSGHLIWEDP
FHFRILAAQGFNPPLIPTKLDITDYLYTRQCRWQFILQQFGFDQEAHHFRCGHCDRCRSR
TSKSRSFH
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atgaggcttgaccattcacaggcttgggatagagccatcgctgggctacagaagttttgg
gggtacagtcagtttcgccctttacagggagaggctgttaccagcctactgaaacaccaa
gatgccttggtgatgctgccaactggctcgggtaaatccgtctgctttcagcttccagca
ctgttacagtctggcctaacgattgtgatctctcctttgattgctctgatggaagatcaa
gtgcaagcactccaggcaaaaaagctacctgctgggatgattcacagccagctctcttct
cagaagcgtcggcagacattgcgacaaatagaacagcagcaattacgcctattatatcta
tctcccgaatccttgttgagcccacccatttggcagcggttaggggatccgcacttgcag
attcgatgtttaattgtggatgaagcccactgcattgagcaatgggggagcagttttcgc
ccagtctatcgccgcttagggtcgattcgggatgcgctattgccaaagaacagtgccgca
cccattaccgtagccgcctatacggcgaccgctaaacccacaacacaagccgcaattcaa
accgtacttcgactgcatcagcctcaggttctgagttgtagtccctatcgaaataatcta
gatttgaccgttgaagtggcctggacccctgcctgtcggcgacaaaaacttttggcattt
attggccgacaggcccattcggcaggactggtgtatacctctagccgacgtttatgtgag
agtttagccgcttggttctgccagcaacatcagcccacggtggcctaccatgcgggactc
agcgcgcctgaacgtcgccgcatcgaagctcagtggcttcaggggaagctaccatttgtg
atttgtacaagtgcgtttggcatgggaattgataaacccgatgtgcggtggatcgcccac
tatcatccccctttgagcttaagtgcttatctgcaagaaatcggtcgggctggtcgagac
aacttgcgatcgcaaaccctgctgctaaccagtgaacccactggttggctggatcctcaa
gatcggcaaatgcgacaatacttcctcaaacagttgaggggacaacaagcatccgcccag
cggttggtccatcgacttccccggcaaggtcatattgacaccatcacaaaagccttccca
gaggccgacctcgccctagcgctcctgcatcagtcgggtcatctcatctgggaggatcca
tttcactttcgaattctggctgctcaagggttcaaccctcccctcattcccaccaagctg
gatatcacggattatctctacacccgccaatgccgttggcaattcattttgcaacagttt
ggttttgaccaagaagcgcatcactttcgatgcggccattgtgatcgctgccgttcccgc
acatccaagtccagatccttccattaa
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