Acaryochloris marina: AM1_5265
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Entry
AM1_5265 CDS
T00617
Symbol
rumA
Name
(GenBank) 23S rRNA (uracil-5-)-methyltransferase RumA
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
amr
Acaryochloris marina
Brite
KEGG Orthology (KO) [BR:
amr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
amr03009
]
AM1_5265 (rumA)
Enzymes [BR:
amr01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
AM1_5265 (rumA)
Ribosome biogenesis [BR:
amr03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
AM1_5265 (rumA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
TRAM
Methyltransf_31
MTS
Cons_hypoth95
Methyltransf_25
TRM5-TYW2_MTfase
Methyltransf_15
RrnaAD
PrmA
DOT1
Methyltransf_11
PCMT
TPMT
Methyltransf_4
Methyltransf_12
Motif
Other DBs
NCBI-ProteinID:
ABW30227
UniProt:
B0C9S9
LinkDB
All DBs
Position
complement(5335247..5336683)
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AA seq
478 aa
AA seq
DB search
MPVDNLQNAQEQQRPESHWQQGSLVDLEITDLSPTGDGVGRWGNQNLVVFVPNTVPGDHI
TVRLIRVKPRYAHGQLQSIKQASPHRVRPQCIVADKCGGCQWQQVDYAYQLVAKQNHVIQ
ALERIGKFQSPVVEPVLAAPSPIEYRNKVTYPIVLSPNTNRVQAGYYRKGSHKLINLNQC
PVQDPHFNSFLAEIKEDIQKQDWPIYNEQNHRGLIRHLSIRIGRRTGEILMTLIINAKPN
QSLSELVDLDAQVQEWLERYPRLVGISLNFNPHRTNRIFGHDSTCIAGHHYLQETFAGLT
FQLRHDTFFQVHTEQAEVLLNTLFDHLQLMGSEQVVDLYCGIGTLTLPLAQRVKEIIGIE
LQAAAVDQAQTNATLNQISNVTFAAGTAKACLRELPFVPDLVLLDPPRKGCHQSVIEQLL
ALKPAQIVYVSCHSATLARDLNLLCQSGQYDLTRVQPVDFFPQTSHVECVAFLNRRAS
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atgccagtggataaccttcaaaatgcccaggaacaacaacgaccagaaagccattggcaa
caaggtagcctagtggatctagagattacagatctcagtccgactggagatggggtgggt
cgatggggaaaccaaaatctggttgtttttgtccccaacaccgtacctggcgatcacatc
actgttcggttgattcgggttaaacccagatatgcccacggtcagcttcaaagtataaag
caggcctcacctcaccgagtgcggccgcaatgcattgtggctgataagtgtggggggtgt
cagtggcagcaggtagactacgcctatcagttggttgccaagcagaatcatgtgattcaa
gccctagagcgaatcggtaaattccagtcccctgttgtcgagccagtgctggctgctcca
tctccgattgagtaccgcaataaggtaacctatcccattgtgttaagccccaacaccaac
cgagtccaggcagggtattaccgcaaagggagccacaagctcattaatctcaatcaatgc
cccgttcaagatcctcactttaattcgtttttagcggaaattaaagaagatattcaaaag
caagattggcccatctataacgaacaaaatcatcggggtctgattcgccacctctcgatc
cgcatcggtcgacggacgggagaaattctaatgacgttgattattaatgccaaaccgaac
caatctttatctgaattagtcgatctagatgcccaagtacaggagtggctggagcgctat
ccccgactagtgggaattagtctgaacttcaatccccatcgaaccaatcgtatctttggc
catgactccacttgcattgccggtcaccactatttgcaagaaacctttgcggggttaacc
tttcagctccgtcatgatacctttttccaggtgcatactgaacaagcggaagttttgctc
aatacccttttcgatcaccttcagcttatgggcagcgaacaggttgttgatctgtactgc
gggattggtactcttacgcttcccctagctcagcgagttaaagagattattgggattgaa
ttgcaggccgcagccgtagaccaagcccagaccaatgccacccttaatcaaattagcaac
gtaacgtttgctgctgggacggccaaagcgtgcttaagggagctgccttttgttccggat
ctggtgctgttagatccgcctcgtaaaggctgccaccaaagtgtgattgaacaactcctg
gctctcaagcctgcgcaaatcgtctatgtcagttgccattccgcgacccttgctcgggat
ttgaatttgctgtgtcaatcaggacaatatgacttgacacgagtccaacccgtcgacttt
tttcctcaaacgtcccatgtggaatgtgtcgcgttcctcaatcggcgggcttcatga
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